RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TMEM65Q6PI78 240 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 NOXA1Q86UR1 476 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 TMEM86BQ8N661 226 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 C5orf56Q8N8D9 126 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 HYLS1Q96M11 299 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 CIB3Q96Q77 187 aaPredicted RBP10.39□□□□□ -0.75
CPNE3-205ENST00000522240 SMR3AQ99954 134 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 RBKSQ9H477 322 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 OR5AC2Q9NZP5 309 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 WSB1Q9Y6I7 421 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 FXYD6-FXYD2A0A087WZ82 144 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 TEX50A0A1B0GTY4 177 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 A0A1W2PN81 502 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 NCBP2LA6PVI3 153 aaKnown RBP10.38□□□□□ -0.75
CPNE3-205ENST00000522240 CEBPZOSA8MTT3 80 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 BOLA2-SMG1P6H3BVE0 249 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 L7N2F9 121 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 GPR137BO60478 399 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 CA2P00918 260 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 IGHV4-59P01825 116 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 HNRNPCP07910 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
CPNE3-205ENST00000522240 CHRNA7P36544 502 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 RPL27AP46776 148 aaKnown RBP10.38□□□□□ -0.75
CPNE3-205ENST00000522240 VAMP2P63027 116 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 PJVKQ0ZLH3 352 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 TNXAQ16473 311 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 MRPL41Q8IXM3 137 aaKnown RBP10.38□□□□□ -0.75
CPNE3-205ENST00000522240 OR11H4Q8NGC9 324 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 DTD1Q8TEA8 209 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 RASL11BQ9BPW5 248 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 SRSF8Q9BRL6 282 aaKnown RBP10.38□□□□□ -0.75
CPNE3-205ENST00000522240 RNF126Q9BV68 326 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 MAGT1Q9H0U3 335 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 PLEKHA3Q9HB20 300 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 VPREB3Q9UKI3 123 aa10.38□□□□□ -0.75
CPNE3-205ENST00000522240 CHST1O43916 411 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 TSC22D2O75157 780 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 SRD5A1P18405 259 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 ATF4P18848 351 aaPredicted RBP10.37□□□□□ -0.75
CPNE3-205ENST00000522240 VDAC2P45880 294 aaPredicted RBP10.37□□□□□ -0.75
CPNE3-205ENST00000522240 P2RY1P47900 373 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 HOXA1P49639 335 aaPredicted RBP10.37□□□□□ -0.75
CPNE3-205ENST00000522240 RPL23AP62750 156 aaKnown RBP10.37□□□□□ -0.75
CPNE3-205ENST00000522240 SSBP2P81877 361 aaPredicted RBP10.37□□□□□ -0.75
CPNE3-205ENST00000522240 LY6EQ16553 131 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 ZNF562Q6V9R5 426 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 HSD17B13Q7Z5P4 300 aaPredicted RBP10.37□□□□□ -0.75
CPNE3-205ENST00000522240 TMEM219Q86XT9 240 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 SIGLECL1Q8N7X8 197 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 SRSF12Q8WXF0 261 aaKnown RBP10.37□□□□□ -0.75
CPNE3-205ENST00000522240 DCUN1D4Q92564 292 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 SMIM8Q96KF7 97 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 CLCC1Q96S66 551 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 NDUFA4L2Q9NRX3 87 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 TNFSF18Q9UNG2 199 aa10.37□□□□□ -0.75
CPNE3-205ENST00000522240 TET2Q6N021 2002 aaPredicted RBP10.36□□□□□ -0.75
CPNE3-205ENST00000522240 CGB1A6NKQ9 187 aa10.36□□□□□ -0.75
CPNE3-205ENST00000522240 SCAF4O95104 1147 aaKnown RBP10.36□□□□□ -0.75
CPNE3-205ENST00000522240 IAPPP10997 89 aa10.36□□□□□ -0.75
CPNE3-205ENST00000522240 MYOD1P15172 320 aa10.36□□□□□ -0.75
CPNE3-205ENST00000522240 C10orf55Q5SWW7 151 aa10.36□□□□□ -0.75
CPNE3-205ENST00000522240 AQP10Q96PS8 301 aa10.36□□□□□ -0.75
CPNE3-205ENST00000522240 HIPK2Q9H2X6 1198 aa10.36□□□□□ -0.75
CPNE3-205ENST00000522240 ENY2Q9NPA8 101 aa10.36□□□□□ -0.75
CPNE3-205ENST00000522240 LYRM2Q9NU23 88 aaPredicted RBP10.36□□□□□ -0.75
CPNE3-205ENST00000522240 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
CPNE3-205ENST00000522240 IGHV7-81A0A0B4J1V7 117 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 RNF222A6NCQ9 220 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 FCN1O00602 326 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 HOXA3O43365 443 aaPredicted RBP10.35□□□□□ -0.75
CPNE3-205ENST00000522240 TMEM50AO95807 157 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 NUP62P37198 522 aaPredicted RBP10.35□□□□□ -0.75
CPNE3-205ENST00000522240 PAX9P55771 341 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 ATP5IP56385 69 aaPredicted RBP10.35□□□□□ -0.75
CPNE3-205ENST00000522240 GNB1P62873 340 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 CX3CL1P78423 397 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 ZNF345Q14585 488 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 SPINK9Q5DT21 86 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 RBMS3Q6XE24 437 aaKnown RBP10.35□□□□□ -0.75
CPNE3-205ENST00000522240 ZNF546Q86UE3 836 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 OR2C3Q8N628 320 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 ARPC1AQ92747 370 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 HINT2Q9BX68 163 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 HEYLQ9NQ87 328 aaPredicted RBP10.35□□□□□ -0.75
CPNE3-205ENST00000522240 PSENENQ9NZ42 101 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 TNCP24821 2201 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 SVEP1Q4LDE5 3571 aa10.35□□□□□ -0.75
CPNE3-205ENST00000522240 A0A1B0GW64 132 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 IGLC7A0M8Q6 106 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 ADARB2-AS1A8MUL3 147 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 TEX22C9J3V5 150 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 ARPC5O15511 151 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 CNIH1O95406 144 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 PF4P02776 101 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 AMY1AP04745 511 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 EIF2B2P49770 351 aaKnown RBP10.34□□□□□ -0.75
CPNE3-205ENST00000522240 CRIP2P52943 208 aaPredicted RBP10.34□□□□□ -0.75
CPNE3-205ENST00000522240 RPP30P78346 268 aaKnown RBP10.34□□□□□ -0.75
CPNE3-205ENST00000522240 NDPQ00604 133 aa10.34□□□□□ -0.75
CPNE3-205ENST00000522240 OR2F1Q13607 317 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms