RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 KBTBD11O94819 623 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 DHFRP00374 187 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 DEFA4P12838 97 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 PSMD7P51665 324 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 SCAND1P57086 179 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 RPL30P62888 115 aaKnown RBP6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 CBX3Q13185 183 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 UNC119Q13432 240 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 IGSF11Q5DX21 431 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 ZNF705AQ6ZN79 300 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 AQP12AQ8IXF9 295 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 NIPSNAP3BQ9BS92 247 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 ATG101Q9BSB4 218 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 IMPAD1Q9NX62 359 aa6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 SMPD3Q9NY59 655 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC9-212ENST00000521944 PKHD1L1Q86WI1 4243 aa6.15□□□□□ -1.43
TRAPPC9-212ENST00000521944 FOXI3A8MTJ6 420 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 ZNF705FA8MVS1 300 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 B5MCH6 92 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 OGG1O15527 345 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 FCGR3BO75015 233 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 TMEM127O75204 238 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 LALBAP00709 142 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 ZNF705DP0CH99 300 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 ZNF705BP0CI00 300 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 LIMS3P0CW19 117 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 LIMS4P0CW20 117 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 GBX2P52951 348 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 OR2B8PP59922 312 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 QRFPP83859 136 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 MRPL28Q13084 256 aaKnown RBP6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 TPBGQ13641 420 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 OXA1LQ15070 435 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 ACTL10Q5JWF8 245 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 UBE2UQ5VVX9 321 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 SPSB3Q6PJ21 355 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 CDH26Q8IXH8 852 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 ARHGAP24Q8N264 748 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 SCARB1Q8WTV0 552 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 DGCR14Q96DF8 476 aaKnown RBP6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 NEU1Q99519 415 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 TM2D1Q9BX74 207 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 GABARAPL3Q9BY60 117 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 KRTAP4-2Q9BYR5 136 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 RIMS4Q9H426 269 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 VSIRQ9H7M9 311 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 Q9H8V8 135 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 XCL2Q9UBD3 114 aa6.14□□□□□ -1.43
TRAPPC9-212ENST00000521944 TRBV6-7A0A0A0MS04 114 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 TRAV14DV4A0A0A6YYC5 116 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 TRAV2A0A0B4J234 112 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 IGHV3-66A0A0C4DH42 116 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 TCRBV3S1A0A5B6 114 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 TRDCB7Z8K6 153 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 SOCS1O15524 211 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 IGLV2-14P01704 120 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 SRMP19623 302 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 CELP19835 753 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 TMEM50BP56557 158 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 PAFAH1B2P68402 229 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 PLA2G7Q13093 441 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 ARFRP1Q13795 201 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 OR2B11Q5JQS5 317 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 RPL22L1Q6P5R6 122 aaKnown RBP6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 C15orf53Q8NAA6 179 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 OR10W1Q8NGF6 305 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 TRUB1Q8WWH5 349 aaKnown RBP6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 ADTRPQ96IZ2 230 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 GABARAPL1Q9H0R8 117 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 Q9H3A6 140 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 AMBNQ9NP70 447 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 PLEKHJ1Q9NW61 149 aa6.13□□□□□ -1.43
TRAPPC9-212ENST00000521944 G3V2T6 193 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 K7EIM0 57 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 K7EQG2 157 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 DNASE2O00115 360 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 BET1O15155 118 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 GABRB1P18505 474 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 RPL8P62917 257 aaKnown RBP6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 CCDC58Q4VC31 144 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 GGHQ92820 318 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 PGLYRP3Q96LB9 341 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 CMTM3Q96MX0 182 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 RAB40CQ96S21 281 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 UQCC2Q9BRT2 126 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 DCUN1D5Q9BTE7 237 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 CABLES2Q9BTV7 478 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 C21orf62Q9NYP8 219 aa6.12□□□□□ -1.43
TRAPPC9-212ENST00000521944 TRAV3A0A0B4J244 114 aa6.11□□□□□ -1.43
TRAPPC9-212ENST00000521944 ZNF688P0C7X2 276 aa6.11□□□□□ -1.43
TRAPPC9-212ENST00000521944 HLA-GP17693 338 aa6.11□□□□□ -1.43
TRAPPC9-212ENST00000521944 SERPINB10P48595 397 aa6.11□□□□□ -1.43
TRAPPC9-212ENST00000521944 WT1-ASQ06250 92 aa6.11□□□□□ -1.43
TRAPPC9-212ENST00000521944 EIF4EBP1Q13541 118 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC9-212ENST00000521944 Q499Y3 187 aa6.11□□□□□ -1.43
TRAPPC9-212ENST00000521944 TOR2AQ5JU69 321 aa6.11□□□□□ -1.43
TRAPPC9-212ENST00000521944 SSX7Q7RTT5 188 aa6.11□□□□□ -1.43
TRAPPC9-212ENST00000521944 CBR4Q8N4T8 237 aa6.11□□□□□ -1.43
TRAPPC9-212ENST00000521944 FAM89BQ8N5H3 189 aa6.11□□□□□ -1.43
TRAPPC9-212ENST00000521944 DUSP18Q8NEJ0 188 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms