RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 LPAR6P43657 344 aa11.92□□□□□ -0.5
CLN8-205ENST00000520991 SLC16A13Q7RTY0 426 aa11.92□□□□□ -0.5
CLN8-205ENST00000520991 HSD17B13Q7Z5P4 300 aaPredicted RBP11.92□□□□□ -0.5
CLN8-205ENST00000520991 GDPD1Q8N9F7 314 aa11.92□□□□□ -0.5
CLN8-205ENST00000520991 UXS1Q8NBZ7 420 aa11.92□□□□□ -0.5
CLN8-205ENST00000520991 OR1L8Q8NGR8 309 aa11.92□□□□□ -0.5
CLN8-205ENST00000520991 ZNF502Q8TBZ5 544 aa11.92□□□□□ -0.5
CLN8-205ENST00000520991 DGCR14Q96DF8 476 aaKnown RBP11.92□□□□□ -0.5
CLN8-205ENST00000520991 HINT2Q9BX68 163 aa11.92□□□□□ -0.5
CLN8-205ENST00000520991 WFDC10AQ9H1F0 79 aa11.92□□□□□ -0.5
CLN8-205ENST00000520991 SRD5A3Q9H8P0 318 aa11.92□□□□□ -0.5
CLN8-205ENST00000520991 RETNQ9HD89 108 aa11.92□□□□□ -0.5
CLN8-205ENST00000520991 COMMD3Q9UBI1 195 aa11.92□□□□□ -0.5
CLN8-205ENST00000520991 TEX50A0A1B0GTY4 177 aa11.91□□□□□ -0.5
CLN8-205ENST00000520991 GPR31O00270 319 aa11.91□□□□□ -0.5
CLN8-205ENST00000520991 SNAPC5O75971 98 aa11.91□□□□□ -0.5
CLN8-205ENST00000520991 KRASP01116 189 aa11.91□□□□□ -0.5
CLN8-205ENST00000520991 EIF4EP06730 217 aaKnown RBP11.91□□□□□ -0.5
CLN8-205ENST00000520991 S100GP29377 79 aa11.91□□□□□ -0.5
CLN8-205ENST00000520991 TM4SF20Q53R12 229 aa11.91□□□□□ -0.5
CLN8-205ENST00000520991 PLET1Q6UQ28 207 aa11.91□□□□□ -0.5
CLN8-205ENST00000520991 TMEM61Q8N0U2 210 aa11.91□□□□□ -0.5
CLN8-205ENST00000520991 FCAMRQ8WWV6 532 aa11.91□□□□□ -0.5
CLN8-205ENST00000520991 MLXQ9UH92 298 aa11.91□□□□□ -0.5
CLN8-205ENST00000520991 DYNC2H1Q8NCM8 4307 aaKnown RBP11.91□□□□□ -0.5
CLN8-205ENST00000520991 IGHV3-35A0A0C4DH35 117 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 RBMY1BA6NDE4 496 aaKnown RBP11.9□□□□□ -0.5
CLN8-205ENST00000520991 RBMY1EA6NEQ0 496 aaKnown RBP11.9□□□□□ -0.5
CLN8-205ENST00000520991 APOA1P02647 267 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 SERPINE2P07093 398 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 RBMY1DP0C7P1 496 aaKnown RBP11.9□□□□□ -0.5
CLN8-205ENST00000520991 PTBP1P26599 531 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLN8-205ENST00000520991 G6PCP35575 357 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 TSPAN5P62079 268 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 NCS1P62166 190 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 WT1-ASQ06250 92 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 PHLDA2Q53GA4 152 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 SLC25A24Q6NUK1 477 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 BTNL8Q6UX41 500 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 UNQ9165/PRO28630Q6UXU0 137 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 LINC00322Q6ZN03 302 aaPredicted RBP11.9□□□□□ -0.5
CLN8-205ENST00000520991 SNX29P2Q8IUI4 249 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 OR52B4Q8NGK2 314 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 VN1R17PQ8TDU5 208 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 FAM110AQ9BQ89 295 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 HIPK2Q9H2X6 1198 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 NSG2Q9Y328 171 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 UFC1Q9Y3C8 167 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 OR51B2Q9Y5P1 312 aa11.9□□□□□ -0.5
CLN8-205ENST00000520991 STARD9Q9P2P6 4700 aa11.9□□□□□ -0.51
CLN8-205ENST00000520991 TGOLN2O43493 480 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 SCAF4O95104 1147 aaKnown RBP11.89□□□□□ -0.51
CLN8-205ENST00000520991 VBP1P61758 197 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 ANKRD55Q3KP44 614 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 ZNF585BQ52M93 769 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 LPCAT3Q6P1A2 487 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 LYSMD2Q8IV50 215 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 GPX8Q8TED1 209 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 LSM10Q969L4 123 aaKnown RBP11.89□□□□□ -0.51
CLN8-205ENST00000520991 MARC2Q969Z3 335 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 FUNDC2Q9BWH2 189 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 SCPEP1Q9HB40 452 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 NDUFA4L2Q9NRX3 87 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 PRNDQ9UKY0 176 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 CSMD3Q7Z407 3707 aa11.89□□□□□ -0.51
CLN8-205ENST00000520991 OR2T8A6NH00 312 aa11.88□□□□□ -0.51
CLN8-205ENST00000520991 RCVRNP35243 200 aa11.88□□□□□ -0.51
CLN8-205ENST00000520991 RBPMS2Q6ZRY4 209 aaKnown RBP11.88□□□□□ -0.51
CLN8-205ENST00000520991 TMEM56Q96MV1 263 aa11.88□□□□□ -0.51
CLN8-205ENST00000520991 CMTM3Q96MX0 182 aa11.88□□□□□ -0.51
CLN8-205ENST00000520991 FKBP11Q9NYL4 201 aa11.88□□□□□ -0.51
CLN8-205ENST00000520991 F11RQ9Y624 299 aaKnown RBP11.88□□□□□ -0.51
CLN8-205ENST00000520991 TENM2Q9NT68 2774 aa11.88□□□□□ -0.51
CLN8-205ENST00000520991 HPGDSO60760 199 aa11.87□□□□□ -0.51
CLN8-205ENST00000520991 ELLP55199 621 aaPredicted RBP11.87□□□□□ -0.51
CLN8-205ENST00000520991 CADM3Q8N126 398 aa11.87□□□□□ -0.51
CLN8-205ENST00000520991 OR5B3Q8NH48 314 aa11.87□□□□□ -0.51
CLN8-205ENST00000520991 BSCL2Q96G97 398 aaPredicted RBP11.87□□□□□ -0.51
CLN8-205ENST00000520991 TSC22D3Q99576 134 aa11.87□□□□□ -0.51
CLN8-205ENST00000520991 ZNF436Q9C0F3 470 aaPredicted RBP11.87□□□□□ -0.51
CLN8-205ENST00000520991 GAR1Q9NY12 217 aaKnown RBP11.87□□□□□ -0.51
CLN8-205ENST00000520991 MRPL27Q9P0M9 148 aaKnown RBP11.87□□□□□ -0.51
CLN8-205ENST00000520991 RYR2Q92736 4967 aa11.87□□□□□ -0.51
CLN8-205ENST00000520991 IGHV3-21A0A0B4J1V1 117 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 TRAV25A0A0B4J276 109 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 LCE6AA0A183 80 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 C8orf88P0DMB2 117 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 ELK1P19419 428 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 TBC1D26Q86UD7 250 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 SLC38A6Q8IZM9 456 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 UBAC2Q8NBM4 344 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 OR1L6Q8NGR2 347 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 TMEM190Q8WZ59 177 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 C21orf62Q9NYP8 219 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 LYSTQ99698 3801 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 SACSQ9NZJ4 4579 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 C15orf61A6NNL5 157 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 FAM25AB3EWG3 89 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 FAM25CB3EWG5 89 aa11.86□□□□□ -0.51
CLN8-205ENST00000520991 FAM25GB3EWG6 89 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms