RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 ZNF716A6NP11 495 aa6.56□□□□□ -1.36
SLIT3-205ENST00000519486 SPRY3O43610 288 aa6.56□□□□□ -1.36
SLIT3-205ENST00000519486 RHBDL1O75783 438 aa6.56□□□□□ -1.36
SLIT3-205ENST00000519486 VENTXO95231 258 aa6.56□□□□□ -1.36
SLIT3-205ENST00000519486 PPBPP02775 128 aa6.56□□□□□ -1.36
SLIT3-205ENST00000519486 PFN1P07737 140 aaKnown RBP6.56□□□□□ -1.36
SLIT3-205ENST00000519486 SPSB3Q6PJ21 355 aa6.56□□□□□ -1.36
SLIT3-205ENST00000519486 Q8IYB0 196 aa6.56□□□□□ -1.36
SLIT3-205ENST00000519486 OR2Z1Q8NG97 314 aa6.56□□□□□ -1.36
SLIT3-205ENST00000519486 SLC25A40Q8TBP6 338 aa6.56□□□□□ -1.36
SLIT3-205ENST00000519486 SIGMAR1Q99720 223 aa6.56□□□□□ -1.36
SLIT3-205ENST00000519486 IGHV1-69-2A0A0G2JMI3 117 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 PGLYRP1O75594 196 aaPredicted RBP6.55□□□□□ -1.36
SLIT3-205ENST00000519486 CD55P08174 381 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 STAG3L3P0CL85 134 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 ANOS1P23352 680 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 CEBPDP49716 269 aaPredicted RBP6.55□□□□□ -1.36
SLIT3-205ENST00000519486 UCP2P55851 309 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 AESQ08117 197 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 ZNF826PQ6ZT77 177 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 SELENOHQ8IZQ5 122 aaKnown RBP6.55□□□□□ -1.36
SLIT3-205ENST00000519486 TMEM158Q8WZ71 300 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 DERL1Q9BUN8 251 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 PRDM14Q9GZV8 571 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 PINLYPA6NC86 204 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 S1PR2O95136 353 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 CRYGSP22914 178 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 Q0VFX4 171 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 FAM90A2PQ658T7 463 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 MTCH1Q9NZJ7 389 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 OR1A1Q9P1Q5 309 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 CHD3Q12873 2000 aaKnown RBP6.55□□□□□ -1.36
SLIT3-205ENST00000519486 PTPRSQ13332 1948 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 PDE6DO43924 150 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 MT-ND6P03923 174 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 TSPOP30536 169 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 ADMP35318 185 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 BPIFA4PQ86YQ2 179 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 GPR146Q96CH1 333 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.55□□□□□ -1.36
SLIT3-205ENST00000519486 FCGR3BO75015 233 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 COL8A1P27658 744 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 G6PCP35575 357 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 RFNGQ9Y644 331 aa6.55□□□□□ -1.36
SLIT3-205ENST00000519486 IGKV1D-13A0A0B4J2D9 117 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 IGKV1-13P0DP09 117 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 ABHD14BQ96IU4 210 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 PLA2G2EQ9NZK7 142 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 MRPS16Q9Y3D3 137 aaKnown RBP6.54□□□□□ -1.36
SLIT3-205ENST00000519486 CHD9Q3L8U1 2897 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 FLNBO75369 2602 aaKnown RBP6.54□□□□□ -1.36
SLIT3-205ENST00000519486 CCDC168Q8NDH2 2452 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 IGHV2-70DA0A0C4DH43 119 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 TMEM238LA0A1B0GVL6 79 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 RBFOX2O43251 390 aaKnown RBP eCLIP6.54□□□□□ -1.36
SLIT3-205ENST00000519486 DKK1O94907 266 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 NDUFB4O95168 129 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 OR2H2O95918 312 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 PAX2Q02962 417 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 KIAA1644Q3SXP7 199 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 TEX43Q6ZNM6 134 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 TCF23Q7RTU1 214 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 CLEC5AQ9NY25 188 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.54□□□□□ -1.36
SLIT3-205ENST00000519486 CORTO00230 105 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 ISLRO14498 428 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 HYPMO75409 117 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 CLEC3BP05452 202 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 SLC25A6P12236 298 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 Q6ZVH6 145 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 GGNQ86UU5 652 aa6.54□□□□□ -1.36
SLIT3-205ENST00000519486 TRAV38-1A0A0B4J264 116 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 A0A1B0GUS0 222 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 H0Y980 276 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 IGLC2P0DOY2 106 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 IGLC3P0DOY3 106 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 OTX1P32242 354 aaPredicted RBP6.53□□□□□ -1.36
SLIT3-205ENST00000519486 ARL3P36405 182 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 HES1Q14469 280 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 RSPO1Q2MKA7 263 aaPredicted RBP6.53□□□□□ -1.36
SLIT3-205ENST00000519486 OR8I2Q8N0Y5 310 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 LRRC29Q8WV35 223 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 C1QTNF5Q9BXJ0 243 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 PRRC2CQ9Y520 2896 aaKnown RBP6.53□□□□□ -1.36
SLIT3-205ENST00000519486 TRAV1-1A0A0B4J248 108 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 ODAMA1E959 279 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 CEACAM4O75871 244 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 TCL1AP56279 114 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 FAM27E3Q08E93 113 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 MDS2Q8NDY4 140 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 MSI2Q96DH6 328 aaKnown RBP6.53□□□□□ -1.36
SLIT3-205ENST00000519486 USF3Q68DE3 2245 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 MED13Q9UHV7 2174 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 TRAV9-2A0A087WT02 112 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 K7EQM0 130 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 BMPR1BO00238 502 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 NEURL1O76050 574 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 CDKN1AP38936 164 aa6.53□□□□□ -1.36
SLIT3-205ENST00000519486 MRPL54Q6P161 138 aaKnown RBP6.53□□□□□ -1.36
SLIT3-205ENST00000519486 ST6GALNAC6Q969X2 333 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms