RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 BEST4Q8NFU0 473 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 ST8SIA2Q92186 375 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 ARPC1AQ92747 370 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 HARBI1Q96MB7 349 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 SLC5A7Q9GZV3 580 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 NIT2Q9NQR4 276 aa7.21□□□□□ -1.26
HDAC3-215ENST00000519474 LSM4Q9Y4Z0 139 aaKnown RBP7.21□□□□□ -1.26
HDAC3-215ENST00000519474 IGHV4OR15-8A0A075B7B6 117 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 A0A087WW49 117 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 TRAV34A0A0B4J273 112 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 LINC01619G3V211 115 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 SULT1C2O00338 296 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 CCSO14618 274 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 OVOL1O14753 267 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 XRCC3O43542 346 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 BRI3O95415 125 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 OR8U8P0C7N1 319 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 SLURP1P55000 103 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 BLOC1S1P78537 153 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 PRSS8Q16651 343 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 TIMM50Q3ZCQ8 353 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 ZBTB34Q8NCN2 500 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 OSR1Q8TAX0 266 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-215ENST00000519474 ZFAND1Q8TCF1 268 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 SFT2D1Q8WV19 159 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 SNAPC3Q92966 411 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 S100A16Q96FQ6 103 aaKnown RBP7.2□□□□□ -1.26
HDAC3-215ENST00000519474 C14orf144Q96I85 54 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 GPHA2Q96T91 129 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 FUNDC2Q9BWH2 189 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 CCL28Q9NRJ3 127 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 ZNF355PQ9NSJ1 428 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 MED9Q9NWA0 146 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 MGAT4CQ9UBM8 478 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 MLXQ9UH92 298 aa7.2□□□□□ -1.26
HDAC3-215ENST00000519474 ELOA3CA0A087WX78 387 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-215ENST00000519474 FCGR3BO75015 233 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 RBMXL2O75526 392 aaKnown RBP7.19□□□□□ -1.26
HDAC3-215ENST00000519474 PTTG1O95997 202 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 TRGV3P03979 118 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 LGALS1P09382 135 aaKnown RBP7.19□□□□□ -1.26
HDAC3-215ENST00000519474 AADACP22760 399 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 FCGR2CP31995 323 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 ECI1P42126 302 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 INSL3P51460 131 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 TPPP2P59282 170 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 VMA21Q3ZAQ7 101 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 RNASE10Q5GAN6 216 aaKnown RBP7.19□□□□□ -1.26
HDAC3-215ENST00000519474 DHRS11Q6UWP2 260 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 LYSMD2Q8IV50 215 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 POC5Q8NA72 575 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 OR6F1Q8NGZ6 308 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 DCUN1D5Q9BTE7 237 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 MIXL1Q9H2W2 232 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 ZNF430Q9H8G1 570 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-215ENST00000519474 TNCP24821 2201 aa7.19□□□□□ -1.26
HDAC3-215ENST00000519474 MEIS3P1A6NDR6 274 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 E7EUB6 86 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 H3BUA1 57 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 RGS5O15539 181 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 SAA1P0DJI8 122 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-215ENST00000519474 APELAP0DMC3 54 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 NQO2P16083 231 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 RFX2P48378 723 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 TNFRSF9Q07011 255 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 TNXAQ16473 311 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 GUK1Q16774 197 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 ACSM6Q6P461 480 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 ZNF66Q6ZN08 573 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 KCTD9Q7L273 389 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 OVCH2Q7RTZ1 564 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 MRPL52Q86TS9 123 aaKnown RBP7.18□□□□□ -1.26
HDAC3-215ENST00000519474 ZNF429Q86V71 674 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 SELENOHQ8IZQ5 122 aaKnown RBP7.18□□□□□ -1.26
HDAC3-215ENST00000519474 VKORC1L1Q8N0U8 176 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 PUSL1Q8N0Z8 303 aaKnown RBP7.18□□□□□ -1.26
HDAC3-215ENST00000519474 OR5AP2Q8NGF4 316 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 AP3S1Q92572 193 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 SLC25A46Q96AG3 418 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 PACRGQ96M98 296 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-215ENST00000519474 PRR25Q96S07 402 aa7.18□□□□□ -1.26
HDAC3-215ENST00000519474 HSD17B10Q99714 261 aaKnown RBP7.18□□□□□ -1.26
HDAC3-215ENST00000519474 RANGRFQ9HD47 186 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-215ENST00000519474 PRKDCP78527 4128 aaKnown RBP7.18□□□□□ -1.26
HDAC3-215ENST00000519474 TRBV9A0A0B4J1U6 114 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 A0A0G2JLM5 398 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 DLEU1O43261 78 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 PPYP01298 95 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 IL6RP08887 468 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-215ENST00000519474 NBEAP1P0C6P0 100 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 OR9G9P0C7N8 305 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 GNRHRP30968 328 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 ARL3P36405 182 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 ELLP55199 621 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-215ENST00000519474 TAS2R20P59543 309 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 UBE2G2P60604 165 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 NCS1P62166 190 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 KLF5Q13887 457 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-215ENST00000519474 MSMO1Q15800 293 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 BAK1Q16611 211 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms