RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 DMBX1Q8NFW5 382 aa6.05□□□□□ -1.44
SDCBP-206ENST00000519115 NPBQ8NG41 125 aa6.05□□□□□ -1.44
SDCBP-206ENST00000519115 OR4A16Q8NH70 328 aa6.05□□□□□ -1.44
SDCBP-206ENST00000519115 OR1S1Q8NH92 325 aa6.05□□□□□ -1.44
SDCBP-206ENST00000519115 RNASE11Q8TAA1 199 aaKnown RBP6.05□□□□□ -1.44
SDCBP-206ENST00000519115 TMEM167AQ8TBQ9 72 aa6.05□□□□□ -1.44
SDCBP-206ENST00000519115 PHYHIPLQ96FC7 376 aa6.05□□□□□ -1.44
SDCBP-206ENST00000519115 GGACTQ9BVM4 153 aa6.05□□□□□ -1.44
SDCBP-206ENST00000519115 TMA7Q9Y2S6 64 aaKnown RBP6.05□□□□□ -1.44
SDCBP-206ENST00000519115 SIGLEC9Q9Y336 463 aa6.05□□□□□ -1.44
SDCBP-206ENST00000519115 TET2Q6N021 2002 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-206ENST00000519115 IGHV3-72A0A0B4J1Y9 119 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 CLPSL1A2RUU4 121 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 RNF222A6NCQ9 220 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 C15orf61A6NNL5 157 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 WRBO00258 174 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 UPK2O00526 184 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 SHOXO15266 292 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 SOX15O60248 233 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 JTBO76095 146 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 KBTBD11O94819 623 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 CRYZL1O95825 349 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 G6PCP35575 357 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 AP2S1P53680 142 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-206ENST00000519115 ATP6V1FQ16864 119 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 EIF5AL1Q6IS14 154 aaKnown RBP6.04□□□□□ -1.44
SDCBP-206ENST00000519115 TMUB2Q71RG4 321 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 ZNF767PQ75MW2 155 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 MOB3BQ86TA1 216 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 MMD2Q8IY49 270 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 OR2C3Q8N628 320 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 LINC01006Q8NI28 216 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 GRPEL2Q8TAA5 225 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 WFDC12Q8WWY7 111 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 RBMXL1Q96E39 390 aaKnown RBP6.04□□□□□ -1.44
SDCBP-206ENST00000519115 NPFFR1Q9GZQ6 430 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 LYRM2Q9NU23 88 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-206ENST00000519115 MBD2Q9UBB5 411 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 CACNG5Q9UF02 275 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 PITPNC1Q9UKF7 332 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 RNF114Q9Y508 228 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 HSPB11Q9Y547 144 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 PLXNB1O43157 2135 aa6.04□□□□□ -1.44
SDCBP-206ENST00000519115 FXYD6-FXYD2A0A087WZ82 144 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 A0A1B0GUS0 222 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 KANTRA0A1W2PQU2 76 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 SH2D7A6NKC9 451 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-206ENST00000519115 FNDC10F2Z333 226 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 H7C2Y5 167 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 ARPC5O15511 151 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 NDUFA3O95167 84 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 MOSP00540 346 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 IFNA7P01567 189 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 IGKV1-16P04430 117 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 CRYGBP07316 175 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 SNRNP70P08621 437 aaKnown RBP6.03□□□□□ -1.44
SDCBP-206ENST00000519115 FAM106CPP0CH98 169 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 CXCL2P19875 107 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 RPL12P30050 165 aaKnown RBP6.03□□□□□ -1.44
SDCBP-206ENST00000519115 PAX9P55771 341 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 RPS16P62249 146 aaKnown RBP6.03□□□□□ -1.44
SDCBP-206ENST00000519115 RPL8P62917 257 aaKnown RBP6.03□□□□□ -1.44
SDCBP-206ENST00000519115 VAMP2P63027 116 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 HES1Q14469 280 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 HNF4GQ14541 408 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 OPCMLQ14982 345 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 TMEM95Q3KNT9 176 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 CXorf66Q5JRM2 361 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-206ENST00000519115 OR4A47Q6IF82 309 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 Q6ZS46 218 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 UBAC2Q8NBM4 344 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 OR1L8Q8NGR8 309 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 OR2T10Q8NGZ9 312 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 STOML3Q8TAV4 291 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 LRRC20Q8TCA0 184 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 CFHR4Q92496 578 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 DCUN1D4Q92564 292 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 CLCC1Q96S66 551 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 GPHA2Q96T91 129 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 SLC25A33Q9BSK2 321 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 ZNF747Q9BV97 191 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 MRPL20Q9BYC9 149 aaKnown RBP6.03□□□□□ -1.44
SDCBP-206ENST00000519115 PARD6GQ9BYG4 376 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-206ENST00000519115 HIPK2Q9H2X6 1198 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 C16orf95Q9H693 158 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 ZNF702PQ9H963 129 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 TMEM140Q9NV12 185 aa6.03□□□□□ -1.44
SDCBP-206ENST00000519115 RCL1Q9Y2P8 373 aaKnown RBP6.03□□□□□ -1.44
SDCBP-206ENST00000519115 A0A0G2JRQ6 117 aa6.02□□□□□ -1.45
SDCBP-206ENST00000519115 A0A1W2PN81 502 aa6.02□□□□□ -1.45
SDCBP-206ENST00000519115 SRRM4A7MD48 611 aaKnown RBP6.02□□□□□ -1.45
SDCBP-206ENST00000519115 BCL2L11O43521 198 aa6.02□□□□□ -1.45
SDCBP-206ENST00000519115 DFFBO76075 338 aa6.02□□□□□ -1.45
SDCBP-206ENST00000519115 IGKV1D-33P01593 117 aa6.02□□□□□ -1.45
SDCBP-206ENST00000519115 IGKV1-33P01594 117 aa6.02□□□□□ -1.45
SDCBP-206ENST00000519115 IGLV2-23P01705 113 aa6.02□□□□□ -1.45
SDCBP-206ENST00000519115 OR8U8P0C7N1 319 aa6.02□□□□□ -1.45
SDCBP-206ENST00000519115 TMEM11P17152 192 aa6.02□□□□□ -1.45
SDCBP-206ENST00000519115 CHRNA7P36544 502 aa6.02□□□□□ -1.45
SDCBP-206ENST00000519115 SULT1A1P50225 295 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms