RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SPEM1Q8N4L4 309 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 IGF2BP2-AS1Q96M15 143 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 KLRF1Q9NZS2 232 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 ZNF407Q9C0G0 2248 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 MED12Q93074 2177 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 PATE4P0C8F1 98 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 FBLP22087 321 aaKnown RBP11.21□□□□□ -0.61
PABPC1-208ENST00000519004 EFNB3Q15768 340 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 SSX8Q7RTT4 187 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 UBALD1Q8TB05 177 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 RNF138Q8WVD3 245 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 FER1L6-AS2Q96M78 137 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 MS4A5Q9H3V2 200 aa11.21□□□□□ -0.61
PABPC1-208ENST00000519004 IGHV3-20A0A0C4DH32 117 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 ANKRD30BLA7E2S9 258 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 LINC00271P0C7V0 271 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 NTF4P34130 210 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 RPL30P62888 115 aaKnown RBP11.2□□□□□ -0.62
PABPC1-208ENST00000519004 WIPI1Q5MNZ9 446 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-208ENST00000519004 FOXI2Q6ZQN5 318 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 NUP35Q8NFH5 326 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 BLNKQ8WV28 456 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 LRRC29Q8WV35 223 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 RAB37Q96AX2 223 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 CHCHD1Q96BP2 118 aaKnown RBP11.2□□□□□ -0.62
PABPC1-208ENST00000519004 MRAP2Q96G30 205 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 PCDH15Q96QU1 1955 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 K7EQM0 130 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 ADH4P08319 380 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 FABP6P51161 128 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 ZNF157P51786 506 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-208ENST00000519004 PRR31Q5SQ13 230 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 FAM162BQ5T6X4 162 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 SSMEM1Q8WWF3 244 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 C5orf30Q96GV9 206 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 C1orf159Q96HA4 380 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
PABPC1-208ENST00000519004 IGHV3-15A0A0B4J1V0 119 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 IGHV5-51A0A0C4DH38 117 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 A0A1W2PRE2 83 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 NEURL1O76050 574 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 ZNF32P17041 273 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 TM4SF4P48230 202 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 BRWD1-AS2P59051 145 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 MAP1LC3CQ9BXW4 147 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 GEMIN7Q9H840 131 aaKnown RBP11.19□□□□□ -0.62
PABPC1-208ENST00000519004 DIDO1Q9BTC0 2240 aaKnown RBP11.19□□□□□ -0.62
PABPC1-208ENST00000519004 C3orf80F5H4A9 247 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 ZNF207O43670 478 aaKnown RBP11.19□□□□□ -0.62
PABPC1-208ENST00000519004 ZXDAP98168 799 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 LINC01545Q5VT33 79 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 LYSMD4Q5XG99 296 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 FAM214BQ7L5A3 538 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 MRPL21Q7Z2W9 205 aaKnown RBP11.19□□□□□ -0.62
PABPC1-208ENST00000519004 C7orf61Q8IZ16 206 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 NEU4Q8WWR8 484 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-208ENST00000519004 KCNIP1Q9NZI2 227 aa11.19□□□□□ -0.62
PABPC1-208ENST00000519004 PRSS46E5RG02 174 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 SYNGR1O43759 233 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 ZIC3O60481 467 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 HNRNPA1P09651 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
PABPC1-208ENST00000519004 IGFBP2P18065 325 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 FASLGP48023 281 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 C1orf61Q13536 156 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 FA2HQ7L5A8 372 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 SLC22A18ASQ8N1D0 253 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 ZNF645Q8N7E2 425 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 ZNF257Q9Y2Q1 563 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 LOC102723996A0A087X1L8 192 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 IGLV3-32A0A0A0MS00 114 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 H0Y8G0 127 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 RBMXL2O75526 392 aaKnown RBP11.18□□□□□ -0.62
PABPC1-208ENST00000519004 GFERP55789 205 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 CEACAM21Q3KPI0 293 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 ADAMTSL5Q6ZMM2 481 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 Q6ZR03 302 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 NHLRC2Q8NBF2 726 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 ZNF488Q96MN9 340 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 TRIB1Q96RU8 372 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 DLL3Q9NYJ7 618 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 MYO7AQ13402 2215 aa11.18□□□□□ -0.62
PABPC1-208ENST00000519004 C17orf98A8MV24 154 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 FABP2P12104 132 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 CAMPP49913 170 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 TFF2Q03403 129 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 EIF4EBP1Q13541 118 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-208ENST00000519004 RUNX3Q13761 415 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 MKXQ8IYA7 352 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 OR13H1Q8NG92 308 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 UCN2Q96RP3 112 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 ZNF355PQ9NSJ1 428 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 MED12LQ86YW9 2145 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 A0A1B0GXF2 115 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 VWC2LB2RUY7 222 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 GGTLC3B5MD39 225 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 NPIPA3F8WFD2 350 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 TSPAN13O95857 204 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 LIPFP07098 398 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 FOXA3P55318 350 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-208ENST00000519004 MIR17HGQ75NE6 70 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms