RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 C5orf49A4QMS7 147 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 IZUMO1RA6ND01 250 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 FADS1O60427 444 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 KCNK2O95069 426 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 FBP1P09467 338 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 PIRTP0C851 137 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 LINC00869P0C866 280 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 COX6A1P12074 109 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 CXCL3P19876 107 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 MSNP26038 577 aaKnown RBP1.89□□□□□ -2.11
HERC4-215ENST00000515753 CA5AP35218 305 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 PSMB3P49720 205 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 SARNPP82979 210 aaKnown RBP1.89□□□□□ -2.11
HERC4-215ENST00000515753 FABP5Q01469 135 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 EMX1Q04741 257 aaPredicted RBP1.89□□□□□ -2.11
HERC4-215ENST00000515753 BIKQ13323 160 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 SP6Q3SY56 376 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 TRMT12Q53H54 448 aaKnown RBP1.89□□□□□ -2.11
HERC4-215ENST00000515753 HIST2H3PS2Q5TEC6 136 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 ELP2Q6IA86 826 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 LCN8Q6JVE9 175 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 PRSS54Q6PEW0 395 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 MARCH3Q86UD3 253 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 RPS19BP1Q86WX3 136 aaKnown RBP1.89□□□□□ -2.11
HERC4-215ENST00000515753 STX12Q86Y82 276 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 ZNF567Q8N184 647 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 LRRC25Q8N386 305 aaPredicted RBP1.89□□□□□ -2.11
HERC4-215ENST00000515753 PLPP5Q8NEB5 264 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 UBALD1Q8TB05 177 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 PSMF1Q92530 271 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 ACY3Q96HD9 319 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 REEP6Q96HR9 211 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 PYURFQ96I23 114 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 SLC35G5Q96KT7 338 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 C1orf50Q9BV19 199 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 GNB1LQ9BYB4 327 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 GTSF1LQ9H1H1 148 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 OR51I1Q9H343 314 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 FAM60AQ9NP50 221 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 TMEM38BQ9NVV0 291 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 ATPIF1Q9UII2 106 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 ARL2BPQ9Y2Y0 163 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 SLC22A7Q9Y694 548 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 ACACAQ13085 2346 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 DOCK9Q9BZ29 2069 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 ASPMQ8IZT6 3477 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 EML5Q05BV3 1969 aa1.89□□□□□ -2.11
HERC4-215ENST00000515753 SPEGQ15772 3267 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 HELZP42694 1942 aaKnown RBP1.88□□□□□ -2.11
HERC4-215ENST00000515753 hCG_1818297A0A087WSY0 165 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 A0A087X0T9 212 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 CLDN24A6NM45 220 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 MIF4GDA9UHW6 222 aaKnown RBP1.88□□□□□ -2.11
HERC4-215ENST00000515753 E5RI56 91 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 PSMD12O00232 456 aaPredicted RBP1.88□□□□□ -2.11
HERC4-215ENST00000515753 MED6O75586 246 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 CCNKO75909 580 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 LHBP01229 141 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 LTAP01374 205 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 OR5G3P0C626 314 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 OR5AC1P0C628 307 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 FAM228BP0C875 321 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 CD28P10747 220 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 CXCL2P19875 107 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 NTF3P20783 257 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 RPS3P23396 243 aaKnown RBP eCLIP1.88□□□□□ -2.11
HERC4-215ENST00000515753 MPV17P39210 176 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 GDI2P50395 445 aaKnown RBP1.88□□□□□ -2.11
HERC4-215ENST00000515753 ZNF140P52738 457 aaPredicted RBP1.88□□□□□ -2.11
HERC4-215ENST00000515753 RWDD2BP57060 319 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 KRTAP10-10P60014 251 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 B2MP61769 119 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 DYNLT1P63172 113 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 TMEM267Q0VDI3 215 aaPredicted RBP1.88□□□□□ -2.11
HERC4-215ENST00000515753 RSU1Q15404 277 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 GUK1Q16774 197 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 MESTQ5EB52 335 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 FAM78BQ5VT40 261 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 OR10K2Q6IF99 312 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 SFXN4Q6P4A7 337 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 FAM131AQ6UXB0 335 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 CCDC121Q6ZUS5 278 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 NEGR1Q7Z3B1 354 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 DOLPP1Q86YN1 238 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 MIR7-3HGQ8N6C7 128 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 UBL4BQ8N7F7 174 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 CLDN22Q8N7P3 220 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 TMEM75Q8N9X5 138 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 OR2K2Q8NGT1 345 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 OR2V1Q8NHB1 315 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 ZNRF2Q8NHG8 242 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 EEF1AKMT1Q8WVE0 214 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 SKA2Q8WVK7 121 aaPredicted RBP1.88□□□□□ -2.11
HERC4-215ENST00000515753 APOBEC3DQ96AK3 386 aaPredicted RBP1.88□□□□□ -2.11
HERC4-215ENST00000515753 RBMXL1Q96E39 390 aaKnown RBP1.88□□□□□ -2.11
HERC4-215ENST00000515753 RMND5BQ96G75 393 aaPredicted RBP1.88□□□□□ -2.11
HERC4-215ENST00000515753 PECRQ9BY49 303 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 TLNRD1Q9H1K6 362 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 INIPQ9NRY2 104 aa1.88□□□□□ -2.11
HERC4-215ENST00000515753 OPN4Q9UHM6 478 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms