RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TRAV41A0A0B4J266 112 aa16.5■□□□□ 0.23
LSM6-207ENST00000515311 C13orf42A0A1B0GVH6 325 aa16.5■□□□□ 0.23
LSM6-207ENST00000515311 C5orf51A6NDU8 294 aa16.5■□□□□ 0.23
LSM6-207ENST00000515311 FAM25EA8MYX2 175 aa16.5■□□□□ 0.23
LSM6-207ENST00000515311 TNFRSF9Q07011 255 aa16.5■□□□□ 0.23
LSM6-207ENST00000515311 ZBTB8BQ8NAP8 495 aaPredicted RBP16.5■□□□□ 0.23
LSM6-207ENST00000515311 C2orf50Q96LR7 162 aa16.5■□□□□ 0.23
LSM6-207ENST00000515311 NOL4LQ96MY1 436 aaPredicted RBP16.5■□□□□ 0.23
LSM6-207ENST00000515311 WNT10AQ9GZT5 417 aa16.5■□□□□ 0.23
LSM6-207ENST00000515311 IGLC7A0M8Q6 106 aa16.49■□□□□ 0.23
LSM6-207ENST00000515311 CLPSL1A2RUU4 121 aa16.49■□□□□ 0.23
LSM6-207ENST00000515311 RRAS2P62070 204 aaPredicted RBP16.49■□□□□ 0.23
LSM6-207ENST00000515311 ASPHD1Q5U4P2 390 aa16.49■□□□□ 0.23
LSM6-207ENST00000515311 MRPL41Q8IXM3 137 aaKnown RBP16.49■□□□□ 0.23
LSM6-207ENST00000515311 LFNGQ8NES3 379 aa16.49■□□□□ 0.23
LSM6-207ENST00000515311 OR4D5Q8NGN0 318 aa16.49■□□□□ 0.23
LSM6-207ENST00000515311 HINT2Q9BX68 163 aa16.49■□□□□ 0.23
LSM6-207ENST00000515311 MGAT4CQ9UBM8 478 aa16.49■□□□□ 0.23
LSM6-207ENST00000515311 WSB1Q9Y6I7 421 aa16.49■□□□□ 0.23
LSM6-207ENST00000515311 A0A1W2PN81 502 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 TMEM89A2RUT3 159 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 INS-IGF2F8WCM5 200 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 G3V318 75 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 CHRNA7P36544 502 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 CFHR3Q02985 330 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 FOXL1Q12952 345 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 ECSCRQ19T08 205 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 UNQ5815/PRO19632Q6UWF5 114 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 OR10W1Q8NGF6 305 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 PLEKHA3Q9HB20 300 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 LINC00527Q9UJ94 153 aa16.48■□□□□ 0.23
LSM6-207ENST00000515311 HMX3A6NHT5 357 aa16.47■□□□□ 0.23
LSM6-207ENST00000515311 MDKP21741 143 aaPredicted RBP16.47■□□□□ 0.23
LSM6-207ENST00000515311 H2BFSP57053 126 aa16.47■□□□□ 0.23
LSM6-207ENST00000515311 RIPPLY3P57055 190 aa16.47■□□□□ 0.23
LSM6-207ENST00000515311 ID3Q02535 119 aa16.47■□□□□ 0.23
LSM6-207ENST00000515311 CXorf66Q5JRM2 361 aaPredicted RBP16.47■□□□□ 0.23
LSM6-207ENST00000515311 TMEM158Q8WZ71 300 aa16.47■□□□□ 0.23
LSM6-207ENST00000515311 GSKIPQ9P0R6 139 aa16.47■□□□□ 0.23
LSM6-207ENST00000515311 RNF114Q9Y508 228 aa16.47■□□□□ 0.23
LSM6-207ENST00000515311 NPIPB5A8MRT5 1133 aa16.46■□□□□ 0.23
LSM6-207ENST00000515311 APELAP0DMC3 54 aa16.46■□□□□ 0.23
LSM6-207ENST00000515311 AREGP15514 252 aa16.46■□□□□ 0.23
LSM6-207ENST00000515311 PPIFP30405 207 aaKnown RBP16.46■□□□□ 0.23
LSM6-207ENST00000515311 NKX2-1P43699 371 aaPredicted RBP16.46■□□□□ 0.23
LSM6-207ENST00000515311 PROK1P58294 105 aa16.46■□□□□ 0.23
LSM6-207ENST00000515311 SLC35B1P78383 322 aa16.46■□□□□ 0.23
LSM6-207ENST00000515311 CYCSP99999 105 aaKnown RBP16.46■□□□□ 0.23
LSM6-207ENST00000515311 WT1-ASQ06250 92 aa16.46■□□□□ 0.23
LSM6-207ENST00000515311 FCN2Q15485 313 aa16.46■□□□□ 0.23
LSM6-207ENST00000515311 TTC9CQ8N5M4 171 aa16.46■□□□□ 0.23
LSM6-207ENST00000515311 FAM110DQ8TAY7 271 aaPredicted RBP16.46■□□□□ 0.23
LSM6-207ENST00000515311 NMES1Q9C002 83 aa16.46■□□□□ 0.23
LSM6-207ENST00000515311 PSMB11A5LHX3 300 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 MED6O75586 246 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 NXPH3O95157 252 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 SIX6O95475 246 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 IGHG4P01861 327 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 CRYGCP07315 174 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 CXCL3P19876 107 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 PSMB6P28072 239 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 HOXA1P49639 335 aaPredicted RBP16.45■□□□□ 0.22
LSM6-207ENST00000515311 SRSF4Q08170 494 aaKnown RBP16.45■□□□□ 0.22
LSM6-207ENST00000515311 IL15RAQ13261 267 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 SPINK9Q5DT21 86 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 CENPVQ7Z7K6 275 aaPredicted RBP16.45■□□□□ 0.22
LSM6-207ENST00000515311 KLHDC1Q8N7A1 406 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 OR11H7Q8NGC8 314 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 WIPF2Q8TF74 440 aaPredicted RBP16.45■□□□□ 0.22
LSM6-207ENST00000515311 C19orf24Q9BVV8 132 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 RBKSQ9H477 322 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 ENY2Q9NPA8 101 aa16.45■□□□□ 0.22
LSM6-207ENST00000515311 CEBPZOSA8MTT3 80 aa16.44■□□□□ 0.22
LSM6-207ENST00000515311 BRI3O95415 125 aa16.44■□□□□ 0.22
LSM6-207ENST00000515311 IGLV1-40P01703 118 aa16.44■□□□□ 0.22
LSM6-207ENST00000515311 OR13C7P0DN81 318 aa16.44■□□□□ 0.22
LSM6-207ENST00000515311 CTRB1P17538 263 aa16.44■□□□□ 0.22
LSM6-207ENST00000515311 CTRB2Q6GPI1 263 aa16.44■□□□□ 0.22
LSM6-207ENST00000515311 COMMD1Q8N668 190 aa16.44■□□□□ 0.22
LSM6-207ENST00000515311 ASB13Q8WXK3 278 aa16.44■□□□□ 0.22
LSM6-207ENST00000515311 FBN1P35555 2871 aaKnown RBP16.44■□□□□ 0.22
LSM6-207ENST00000515311 SYNGR2O43760 224 aa16.43■□□□□ 0.22
LSM6-207ENST00000515311 SOX15O60248 233 aa16.43■□□□□ 0.22
LSM6-207ENST00000515311 FBXO24O75426 580 aa16.43■□□□□ 0.22
LSM6-207ENST00000515311 LY86O95711 162 aa16.43■□□□□ 0.22
LSM6-207ENST00000515311 MBPP02686 304 aaPredicted RBP16.43■□□□□ 0.22
LSM6-207ENST00000515311 ERHP84090 104 aaKnown RBP16.43■□□□□ 0.22
LSM6-207ENST00000515311 OR2C3Q8N628 320 aa16.43■□□□□ 0.22
LSM6-207ENST00000515311 ZNF114Q8NC26 417 aa16.43■□□□□ 0.22
LSM6-207ENST00000515311 OR5T1Q8NG75 326 aa16.43■□□□□ 0.22
LSM6-207ENST00000515311 DTD1Q8TEA8 209 aa16.43■□□□□ 0.22
LSM6-207ENST00000515311 HIPK2Q9H2X6 1198 aa16.43■□□□□ 0.22
LSM6-207ENST00000515311 HEYLQ9NQ87 328 aaPredicted RBP16.43■□□□□ 0.22
LSM6-207ENST00000515311 H3BUA1 57 aa16.42■□□□□ 0.22
LSM6-207ENST00000515311 SCGB1D2O95969 90 aa16.42■□□□□ 0.22
LSM6-207ENST00000515311 REG1AP05451 166 aa16.42■□□□□ 0.22
LSM6-207ENST00000515311 FOXE3Q13461 319 aa16.42■□□□□ 0.22
LSM6-207ENST00000515311 TEX38Q6PEX7 206 aa16.42■□□□□ 0.22
LSM6-207ENST00000515311 ZNF329Q86UD4 541 aa16.42■□□□□ 0.22
LSM6-207ENST00000515311 CIB3Q96Q77 187 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms