RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CT55Q8WUE5 264 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 C5orf66Q9H5L9 145 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 ZFAND3Q9H8U3 227 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 PLEKHF2Q9H8W4 249 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 HES4Q9HCC6 221 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 DEPPQ9NTK1 212 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 ZNF835Q9Y2P0 537 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 INSIG2Q9Y5U4 225 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 SYNGR3O43761 229 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 ZNF728P0DKX0 622 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 CT45A10P0DMU9 189 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 FAM27BQ5VT28 67 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 LHFPL1Q86WI0 220 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 LRRC75A-AS1Q8N1F1 130 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 OSR2Q8N2R0 312 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 SCCPDHQ8NBX0 429 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 RAB40CQ96S21 281 aa6.26□□□□□ -1.41
PDLIM5-219ENST00000514743 PINLYPA6NC86 204 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 M0R135 149 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 HPNP05981 417 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 RPL7P18124 248 aaKnown RBP6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 GATA2P23769 480 aaPredicted RBP6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 ARFRP1Q13795 201 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 ZNF506Q5JVG8 444 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 PLXDC2Q6UX71 529 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 OR13C6PQ8NH95 151 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 ZNF799Q96GE5 643 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 DNAJC30Q96LL9 226 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 TM2D1Q9BX74 207 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 ARHGAP21Q5T5U3 1957 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 FRYQ5TBA9 3013 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 A6NDN8 102 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 C9orf118A6NHY6 69 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 SIRPB1O00241 398 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 RS1O15537 224 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 DNPH1O43598 174 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 SUPT4H1P63272 117 aaKnown RBP6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 ACSF3Q4G176 576 aaPredicted RBP6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 TIMM23BQ5SRD1 257 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 TTC9CQ8N5M4 171 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 SPRY4Q9C004 299 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 OR10A2Q9H208 303 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 OR2D2Q9H210 308 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 SH3BGRL3Q9H299 93 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 SDF2L1Q9HCN8 221 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 TP73-AS1Q9UF72 201 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 PIGLQ9Y2B2 252 aa6.25□□□□□ -1.41
PDLIM5-219ENST00000514743 IGKV1-27A0A075B6S5 117 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 TRAV9-2A0A087WT02 112 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 J3QLI3 93 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 RBM11P57052 281 aaKnown RBP6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 PMCHL1Q16048 86 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 TMEM78Q5T7P6 136 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 ZFAND6Q6FIF0 208 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 MRPL54Q6P161 138 aaKnown RBP6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 DDB2Q92466 427 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 NEUROG1Q92886 237 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 SPAG8Q99932 426 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 TAAR3PQ9P1P4 343 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 IGKV1D-8A0A087WSZ0 117 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 MZT1Q08AG7 82 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 UTF1Q5T230 341 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 POC1AQ8NBT0 407 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 OR4F5Q8NH21 305 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 FGFBP3Q8TAT2 258 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 TRGV10A0A0A0MS01 117 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 A0A1W2PNU3 283 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 OR2J3O76001 311 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 GLI4P10075 376 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 CRISP2P16562 243 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 KIR2DL2P43627 348 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 EFNB3Q15768 340 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 LPAL2Q16609 132 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 TEX29Q8N6K0 151 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 ZNF439Q8NDP4 499 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 OR51T1Q8NGJ9 327 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 VSTM2AQ8TAG5 236 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 FLYWCH2Q96CP2 140 aaKnown RBP6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 C10orf35Q96D05 121 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 MCTS1Q9ULC4 181 aaKnown RBP6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 LOXL2Q9Y4K0 774 aa6.24□□□□□ -1.41
PDLIM5-219ENST00000514743 K7N7A8 449 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 FCGR2AP12318 317 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 HTR1DP28221 377 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 ADMP35318 185 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 SNU13P55769 128 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 DCAF12Q5T6F0 453 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 ZADH2Q8N4Q0 377 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 OSR1Q8TAX0 266 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 LOC400499M0QZD8 3231 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 FREM1Q5H8C1 2179 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 CXCL13O43927 109 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 P04436 131 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 PATE4P0C8F1 98 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 IGLL1P15814 213 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 AMY2BP19961 511 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 PPIFP30405 207 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 EMP1P54849 157 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 FAM90A2PQ658T7 463 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 DUX4L9Q6RFH8 374 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms