RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 C19orf73Q9NVV2 129 aa17.47■□□□□ 0.39
CLDND1-230ENST00000514537 MTFP1Q9UDX5 166 aa17.47■□□□□ 0.39
CLDND1-230ENST00000514537 NSG2Q9Y328 171 aa17.47■□□□□ 0.39
CLDND1-230ENST00000514537 IZUMO1RA6ND01 250 aa17.46■□□□□ 0.39
CLDND1-230ENST00000514537 MFSD2BA6NFX1 497 aa17.46■□□□□ 0.39
CLDND1-230ENST00000514537 SNAPC5O75971 98 aa17.46■□□□□ 0.39
CLDND1-230ENST00000514537 WT1-ASQ06250 92 aa17.46■□□□□ 0.39
CLDND1-230ENST00000514537 SPCS2Q15005 226 aa17.46■□□□□ 0.39
CLDND1-230ENST00000514537 SGPP2Q8IWX5 399 aa17.46■□□□□ 0.39
CLDND1-230ENST00000514537 MIXL1Q9H2W2 232 aa17.46■□□□□ 0.39
CLDND1-230ENST00000514537 THYN1Q9P016 225 aa17.46■□□□□ 0.39
CLDND1-230ENST00000514537 C2orf70A6NJV1 201 aa17.45■□□□□ 0.38
CLDND1-230ENST00000514537 IFNA6P05013 189 aa17.45■□□□□ 0.38
CLDND1-230ENST00000514537 CLEC3BP05452 202 aa17.45■□□□□ 0.38
CLDND1-230ENST00000514537 SERPINE2P07093 398 aa17.45■□□□□ 0.38
CLDND1-230ENST00000514537 OR13C7P0DN81 318 aa17.45■□□□□ 0.38
CLDND1-230ENST00000514537 PTBP1P26599 531 aaKnown RBP eCLIP17.45■□□□□ 0.38
CLDND1-230ENST00000514537 LHFPL1Q86WI0 220 aa17.45■□□□□ 0.38
CLDND1-230ENST00000514537 GDPD1Q8N9F7 314 aa17.45■□□□□ 0.38
CLDND1-230ENST00000514537 PRNDQ9UKY0 176 aa17.45■□□□□ 0.38
CLDND1-230ENST00000514537 OR51B2Q9Y5P1 312 aa17.45■□□□□ 0.38
CLDND1-230ENST00000514537 CD3DP04234 171 aa17.44■□□□□ 0.38
CLDND1-230ENST00000514537 FOLR2P14207 255 aa17.44■□□□□ 0.38
CLDND1-230ENST00000514537 TBPP20226 339 aa17.44■□□□□ 0.38
CLDND1-230ENST00000514537 DEFB114Q30KQ6 69 aa17.44■□□□□ 0.38
CLDND1-230ENST00000514537 CD300EQ496F6 205 aaPredicted RBP17.44■□□□□ 0.38
CLDND1-230ENST00000514537 RNASE10Q5GAN6 216 aaKnown RBP17.44■□□□□ 0.38
CLDND1-230ENST00000514537 ARRDC1Q8N5I2 433 aa17.44■□□□□ 0.38
CLDND1-230ENST00000514537 ZNF502Q8TBZ5 544 aa17.44■□□□□ 0.38
CLDND1-230ENST00000514537 LSM10Q969L4 123 aaKnown RBP17.44■□□□□ 0.38
CLDND1-230ENST00000514537 SEC22AQ96IW7 307 aa17.44■□□□□ 0.38
CLDND1-230ENST00000514537 TSC22D3Q99576 134 aa17.44■□□□□ 0.38
CLDND1-230ENST00000514537 FKBP11Q9NYL4 201 aa17.44■□□□□ 0.38
CLDND1-230ENST00000514537 CTDSP2O14595 271 aa17.43■□□□□ 0.38
CLDND1-230ENST00000514537 IGKV1-39P01597 117 aa17.43■□□□□ 0.38
CLDND1-230ENST00000514537 IGKV1D-39P04432 117 aa17.43■□□□□ 0.38
CLDND1-230ENST00000514537 EDN2P20800 178 aa17.43■□□□□ 0.38
CLDND1-230ENST00000514537 FAM106AQ4KMX7 169 aa17.43■□□□□ 0.38
CLDND1-230ENST00000514537 CLVS1Q8IUQ0 354 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-230ENST00000514537 OR5B3Q8NH48 314 aa17.43■□□□□ 0.38
CLDND1-230ENST00000514537 HINT2Q9BX68 163 aa17.43■□□□□ 0.38
CLDND1-230ENST00000514537 TMEM14BQ9NUH8 114 aa17.43■□□□□ 0.38
CLDND1-230ENST00000514537 DBX1A6NMT0 343 aa17.42■□□□□ 0.38
CLDND1-230ENST00000514537 CYB5BO43169 146 aa17.42■□□□□ 0.38
CLDND1-230ENST00000514537 CD74P04233 296 aa17.42■□□□□ 0.38
CLDND1-230ENST00000514537 RND3P61587 244 aa17.42■□□□□ 0.38
CLDND1-230ENST00000514537 GTSCR1Q86UQ5 136 aa17.42■□□□□ 0.38
CLDND1-230ENST00000514537 LAX1Q8IWV1 398 aa17.42■□□□□ 0.38
CLDND1-230ENST00000514537 VN1R17PQ8TDU5 208 aa17.42■□□□□ 0.38
CLDND1-230ENST00000514537 ZNF486Q96H40 463 aaPredicted RBP17.42■□□□□ 0.38
CLDND1-230ENST00000514537 RCHY1Q96PM5 261 aa17.42■□□□□ 0.38
CLDND1-230ENST00000514537 TECRQ9NZ01 308 aaKnown RBP17.42■□□□□ 0.38
CLDND1-230ENST00000514537 C15orf61A6NNL5 157 aa17.41■□□□□ 0.38
CLDND1-230ENST00000514537 ZNF785A8K8V0 405 aa17.41■□□□□ 0.38
CLDND1-230ENST00000514537 RGS5O15539 181 aa17.41■□□□□ 0.38
CLDND1-230ENST00000514537 MFAP2P55001 183 aa17.41■□□□□ 0.38
CLDND1-230ENST00000514537 SLC25A24Q6NUK1 477 aa17.41■□□□□ 0.38
CLDND1-230ENST00000514537 TMEM229BQ8NBD8 167 aa17.41■□□□□ 0.38
CLDND1-230ENST00000514537 DYNLRB2Q8TF09 96 aa17.41■□□□□ 0.38
CLDND1-230ENST00000514537 RAB2BQ8WUD1 216 aa17.41■□□□□ 0.38
CLDND1-230ENST00000514537 TMEM56Q96MV1 263 aa17.41■□□□□ 0.38
CLDND1-230ENST00000514537 F11RQ9Y624 299 aaKnown RBP17.41■□□□□ 0.38
CLDND1-230ENST00000514537 DNAH7Q8WXX0 4024 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 ZNF320A2RRD8 509 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 A8MWP6 167 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 GABARAPH6UMI1 98 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 PGAM2P15259 253 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 CBLN1P23435 193 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 GPR183P32249 361 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 TMBIM6P55061 237 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 TAS2R19P59542 299 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 H2BFWTQ7Z2G1 175 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 OR4D10Q8NGI6 311 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 BCL7BQ9BQE9 202 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 TM2D3Q9BRN9 247 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 ZMAT4Q9H898 229 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 ZC4H2Q9NQZ6 224 aa17.4■□□□□ 0.38
CLDND1-230ENST00000514537 TMEM213A2RRL7 107 aa17.39■□□□□ 0.37
CLDND1-230ENST00000514537 PI3P19957 117 aa17.39■□□□□ 0.37
CLDND1-230ENST00000514537 PIGPP57054 158 aa17.39■□□□□ 0.37
CLDND1-230ENST00000514537 MRPS10P82664 201 aaKnown RBP17.39■□□□□ 0.37
CLDND1-230ENST00000514537 SSBP1Q04837 148 aaKnown RBP17.39■□□□□ 0.37
CLDND1-230ENST00000514537 PLET1Q6UQ28 207 aa17.39■□□□□ 0.37
CLDND1-230ENST00000514537 TERB2Q8NHR7 220 aa17.39■□□□□ 0.37
CLDND1-230ENST00000514537 DYNC2LI1Q8TCX1 351 aa17.39■□□□□ 0.37
CLDND1-230ENST00000514537 MRGPRFQ96AM1 343 aa17.39■□□□□ 0.37
CLDND1-230ENST00000514537 NBEAL2Q6ZNJ1 2754 aa17.38■□□□□ 0.37
CLDND1-230ENST00000514537 UNQ9165/PRO28630Q6UXU0 137 aa17.38■□□□□ 0.37
CLDND1-230ENST00000514537 OR1L6Q8NGR2 347 aa17.38■□□□□ 0.37
CLDND1-230ENST00000514537 OR4A16Q8NH70 328 aa17.38■□□□□ 0.37
CLDND1-230ENST00000514537 CACNG8Q8WXS5 425 aa17.38■□□□□ 0.37
CLDND1-230ENST00000514537 CCDC59Q9P031 241 aaKnown RBP17.38■□□□□ 0.37
CLDND1-230ENST00000514537 TGOLN2O43493 480 aa17.37■□□□□ 0.37
CLDND1-230ENST00000514537 RAB3DO95716 219 aa17.37■□□□□ 0.37
CLDND1-230ENST00000514537 RPL5P46777 297 aaKnown RBP17.37■□□□□ 0.37
CLDND1-230ENST00000514537 STEAP1BQ6NZ63 245 aa17.37■□□□□ 0.37
CLDND1-230ENST00000514537 SCARB1Q8WTV0 552 aa17.37■□□□□ 0.37
CLDND1-230ENST00000514537 ATP6V0BQ99437 205 aa17.37■□□□□ 0.37
CLDND1-230ENST00000514537 ZNF436Q9C0F3 470 aaPredicted RBP17.37■□□□□ 0.37
CLDND1-230ENST00000514537 TUBA4BQ9H853 241 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms