RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 OR2J1Q9GZK6 312 aa6.09□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF286AQ9HBT8 521 aa6.09□□□□□ -1.44
CLIP1-205ENST00000514271 PLEKHJ1Q9NW61 149 aa6.09□□□□□ -1.44
CLIP1-205ENST00000514271 MRPS16Q9Y3D3 137 aaKnown RBP6.09□□□□□ -1.44
CLIP1-205ENST00000514271 IGSF10Q6WRI0 2623 aa6.09□□□□□ -1.44
CLIP1-205ENST00000514271 POLEQ07864 2286 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 IGHV2-26A0A0B4J1V2 119 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 CTXND1A0A1B0GTU2 59 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 F2Z2F3 143 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 IGLC2P0DOY2 106 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 IGLC3P0DOY3 106 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 PAFAH1B2P68402 229 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 TBC1D28Q2M2D7 210 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 WDR31Q8NA23 367 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 KCNIP2Q9NS61 270 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 RAI1Q7Z5J4 1906 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-205ENST00000514271 ITPR1Q14643 2758 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 A0A1W2PRX2 142 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 MAP1LC3B2A6NCE7 125 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 M0R135 149 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 RRHO14718 337 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 WIPF1O43516 503 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 CRYAAP02489 173 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 GPX1P07203 203 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 IDH3GP51553 393 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-205ENST00000514271 OR10J3Q5JRS4 329 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 STPG4Q8N801 248 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF611Q8N823 705 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF799Q96GE5 643 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 ALKBH3Q96Q83 286 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-205ENST00000514271 MAP1LC3BQ9GZQ8 125 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 FKBP11Q9NYL4 201 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 PLEK2Q9NYT0 353 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 URGCP-MRPS24S4R325 110 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 SMIM27A0A1W2PRY6 76 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF737O75373 536 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 GYPAP02724 150 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 FRMD6-AS1P0C7T7 363 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 MZT1Q08AG7 82 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 TMEM267Q0VDI3 215 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-205ENST00000514271 EFNB3Q15768 340 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 PHLDA2Q53GA4 152 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 PDZD11Q5EBL8 140 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 DMRTA1Q5VZB9 504 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 WDR86Q86TI4 376 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 SPIN2AQ99865 258 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 SPIN2BQ9BPZ2 258 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 OR2W1Q9Y3N9 320 aa6.08□□□□□ -1.44
CLIP1-205ENST00000514271 OOEPA6NGQ2 149 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 C15orf62A8K5M9 175 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 S100A7P31151 101 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 FAM27E3Q08E93 113 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 AKIRIN2Q53H80 203 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 Q8TCH9 128 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 ST6GALNAC6Q969X2 333 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 TMEM18Q96B42 140 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF503Q96F45 646 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 TXNDC17Q9BRA2 123 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 NPCDR1Q9BY65 106 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 GNB1LQ9BYB4 327 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF430Q9H8G1 570 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-205ENST00000514271 CCL28Q9NRJ3 127 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 RALYQ9UKM9 306 aaKnown RBP6.07□□□□□ -1.44
CLIP1-205ENST00000514271 TLN1Q9Y490 2541 aaKnown RBP6.07□□□□□ -1.44
CLIP1-205ENST00000514271 C2orf70A6NJV1 201 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 J3QR06 171 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 SNAI2O43623 268 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 PROP1O75360 226 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 REG1BP48304 166 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 DSCR9P59020 149 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 TMEM136Q6ZRR5 245 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 MUC15Q8N387 334 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 OR2H1Q9GZK4 316 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 WDR83OSQ9Y284 106 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 FRYQ5TBA9 3013 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 EPG5Q9HCE0 2579 aa6.07□□□□□ -1.44
CLIP1-205ENST00000514271 TRBV9A0A0B4J1U6 114 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 IGLC7A0M8Q6 106 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 DEFB108AA8MXU0 73 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 SYNGR2O43760 224 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 ANGPTL7O43827 346 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 SOX15O60248 233 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 HYPMO75409 117 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 THBDP07204 575 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 CD40P25942 277 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 VDAC2P45880 294 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-205ENST00000514271 ARFRP1Q13795 201 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 GNMTQ14749 295 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 CEACAM21Q3KPI0 293 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 OR10G7Q8NGN6 311 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 OR2T10Q8NGZ9 312 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 OR1F12Q8NHA8 337 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 SPTSSAQ969W0 71 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 HARBI1Q96MB7 349 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 GPR173Q9NS66 373 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 TRGV10A0A0A0MS01 117 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 FNDC10F2Z333 226 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 DEGS1O15121 323 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 LYZL6O75951 148 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 CST7O76096 145 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms