RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 MRAPQ8TCY5 172 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 TRIM63Q969Q1 353 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 TP53RKQ96S44 253 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 QTRT1Q9BXR0 403 aaKnown RBP7.42□□□□□ -1.22
RNF4-221ENST00000513643 C5orf66Q9H5L9 145 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 HRASLSQ9HDD0 168 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 GPR132Q9UNW8 380 aa7.42□□□□□ -1.22
RNF4-221ENST00000513643 TENM3Q9P273 2699 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 C15orf61A6NNL5 157 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 INS-IGF2F8WCM5 200 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 NOL3O60936 208 aaKnown RBP7.41□□□□□ -1.22
RNF4-221ENST00000513643 B3GALNT1O75752 331 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 OR2J3O76001 311 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 IGKV1-5P01602 117 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 IGLV1-51P01701 117 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 SERPINE2P07093 398 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 TRAPPC2P0DI81 140 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 TRAPPC2BP0DI82 140 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 HIST1H1BP16401 226 aaKnown RBP7.41□□□□□ -1.22
RNF4-221ENST00000513643 UCP1P25874 307 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 MFAP2P55001 183 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 ZNF79Q15937 498 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 C15orf32Q32M92 178 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 AARDQ4LEZ3 155 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 GDPD1Q8N9F7 314 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 OR10W1Q8NGF6 305 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 OR1L8Q8NGR8 309 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 ZFAND1Q8TCF1 268 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 MARCH1Q8TCQ1 289 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 CCDC140Q96MF4 163 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 COMMD5Q9GZQ3 224 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 FBXL7Q9UJT9 491 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 PRNDQ9UKY0 176 aa7.41□□□□□ -1.22
RNF4-221ENST00000513643 A0A0B4J293 547 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 C3orf85A0A1B0GTC6 90 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 ANKRD34BA5PLL1 514 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 CDS2O95674 445 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 CSN3P07498 182 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 AKAIN1P0CW23 69 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 S100GP29377 79 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 ECI1P42126 302 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 ERVK-16P61578 105 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 EXOSC2Q13868 293 aaKnown RBP7.4□□□□□ -1.22
RNF4-221ENST00000513643 KLF9Q13886 244 aaPredicted RBP7.4□□□□□ -1.22
RNF4-221ENST00000513643 PVRIGQ6DKI7 326 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 FAAP20Q6NZ36 180 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 ADAMTSL5Q6ZMM2 481 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 GPHB5Q86YW7 130 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 OR9G4Q8NGQ1 327 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 GLYATL2Q8WU03 294 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 TSC22D3Q99576 134 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 THAP7Q9BT49 309 aaPredicted RBP7.4□□□□□ -1.22
RNF4-221ENST00000513643 FKBP11Q9NYL4 201 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 NSG2Q9Y328 171 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 OR51B2Q9Y5P1 312 aa7.4□□□□□ -1.22
RNF4-221ENST00000513643 DNAH7Q8WXX0 4024 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 DISC1C4P0D8 188 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 F8W735 103 aaPredicted RBP7.39□□□□□ -1.23
RNF4-221ENST00000513643 LGALS9O00182 355 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 DHFRP00374 187 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 REG1AP05451 166 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 PGAM2P15259 253 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 PPP5CP53041 499 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 SYNJ2BPP57105 145 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 HSPE1P61604 102 aaKnown RBP7.39□□□□□ -1.23
RNF4-221ENST00000513643 ZNF114Q8NC26 417 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 OR51S1Q8NGJ8 323 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 OR6Q1Q8NGQ2 317 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 ZNF502Q8TBZ5 544 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 DEDD2Q8WXF8 326 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 LSM10Q969L4 123 aaKnown RBP7.39□□□□□ -1.23
RNF4-221ENST00000513643 TMEM230Q96A57 120 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 GALNT14Q96FL9 552 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 ZNF414Q96IQ9 312 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 ATP6V0BQ99437 205 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 PRRT1Q99946 306 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 TMEM222Q9H0R3 208 aa7.39□□□□□ -1.23
RNF4-221ENST00000513643 ZNF256Q9Y2P7 627 aaPredicted RBP7.39□□□□□ -1.23
RNF4-221ENST00000513643 F11RQ9Y624 299 aaKnown RBP7.39□□□□□ -1.23
RNF4-221ENST00000513643 TRBV7-1A0A0A6YYK4 115 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 A0A0G2JRQ6 117 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 TEX13DA0A0J9YY54 714 aaPredicted RBP7.38□□□□□ -1.23
RNF4-221ENST00000513643 DPPA5A6NC42 116 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 MFSD2BA6NFX1 497 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 CRYM-AS1A6NIL9 109 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 K7EIM0 57 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 SAP30O75446 220 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 SNAPC5O75971 98 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 OR13C7P0DN81 318 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 SPNP16150 400 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 PRCDQ00LT1 54 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 SP6Q3SY56 376 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 SCGB2B2Q4G0G5 96 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 Q6ZRM9 215 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 H2BFWTQ7Z2G1 175 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 Q8N1Y9 231 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 OR2C3Q8N628 320 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 CCDC71LQ8N9Z2 235 aa7.38□□□□□ -1.23
RNF4-221ENST00000513643 OR1P1Q8NH06 330 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms