RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 IL17DQ8TAD2 202 aa5.53□□□□□ -1.52
HTT-212ENST00000513639 VN1R17PQ8TDU5 208 aa5.53□□□□□ -1.52
HTT-212ENST00000513639 MOB3AQ96BX8 217 aa5.53□□□□□ -1.52
HTT-212ENST00000513639 ISOC1Q96CN7 298 aa5.53□□□□□ -1.52
HTT-212ENST00000513639 DGCR14Q96DF8 476 aaKnown RBP5.53□□□□□ -1.52
HTT-212ENST00000513639 GPHA2Q96T91 129 aa5.53□□□□□ -1.52
HTT-212ENST00000513639 ATP6V0BQ99437 205 aa5.53□□□□□ -1.52
HTT-212ENST00000513639 TSC22D3Q99576 134 aa5.53□□□□□ -1.52
HTT-212ENST00000513639 NEURL2Q9BR09 285 aa5.53□□□□□ -1.52
HTT-212ENST00000513639 THAP7Q9BT49 309 aaPredicted RBP5.53□□□□□ -1.52
HTT-212ENST00000513639 FAM212BQ9NTI7 297 aaPredicted RBP5.53□□□□□ -1.52
HTT-212ENST00000513639 TMEM140Q9NV12 185 aa5.53□□□□□ -1.52
HTT-212ENST00000513639 UFC1Q9Y3C8 167 aa5.53□□□□□ -1.52
HTT-212ENST00000513639 DMRT1Q9Y5R6 373 aa5.53□□□□□ -1.52
HTT-212ENST00000513639 IGLV11-55A0A075B6I3 123 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 TRAV25A0A0B4J276 109 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 TEX50A0A1B0GTY4 177 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 A0A1B0GW64 132 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 IZUMO1RA6ND01 250 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 MEIS3P1A6NDR6 274 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 MARCH11A6NNE9 402 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 OR11H12B2RN74 326 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 KRASP01116 189 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 HLA-AP01891 365 aaKnown RBP5.52□□□□□ -1.53
HTT-212ENST00000513639 FCER2P06734 321 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 OR13C7P0DN81 318 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 MYOD1P15172 320 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 HLA-DMAP28067 261 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 LPAR6P43657 344 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 ELLP55199 621 aaPredicted RBP5.52□□□□□ -1.53
HTT-212ENST00000513639 CD81P60033 236 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 SLC25A24Q6NUK1 477 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 SPSB3Q6PJ21 355 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 RBPMS2Q6ZRY4 209 aaKnown RBP5.52□□□□□ -1.53
HTT-212ENST00000513639 UXS1Q8NBZ7 420 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 C15orf40Q8WUR7 153 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 AP3S1Q92572 193 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 TMEM56Q96MV1 263 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 ZC4H2Q9NQZ6 224 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 GAR1Q9NY12 217 aaKnown RBP5.52□□□□□ -1.53
HTT-212ENST00000513639 MRPL27Q9P0M9 148 aaKnown RBP5.52□□□□□ -1.53
HTT-212ENST00000513639 COMMD3Q9UBI1 195 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 PRNDQ9UKY0 176 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 ANAPC10Q9UM13 185 aa5.52□□□□□ -1.53
HTT-212ENST00000513639 TRAV3A0A0B4J244 114 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 IGLC7A0M8Q6 106 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 EIF4EBP3O60516 100 aaPredicted RBP5.51□□□□□ -1.53
HTT-212ENST00000513639 ATG12O94817 140 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 S1PR2O95136 353 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 IGHV3-23P01764 117 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 REG1AP05451 166 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 C8orf88P0DMB2 117 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 HRH1P35367 487 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 UCP3P55916 312 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 LAMTOR1Q6IAA8 161 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 ADAMTSL5Q6ZMM2 481 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 SLC38A6Q8IZM9 456 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 GDPD1Q8N9F7 314 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 OR5B3Q8NH48 314 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 OR4A16Q8NH70 328 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 ZNF502Q8TBZ5 544 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 GPX8Q8TED1 209 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 FCAMRQ8WWV6 532 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 LSM10Q969L4 123 aaKnown RBP5.51□□□□□ -1.53
HTT-212ENST00000513639 BSCL2Q96G97 398 aaPredicted RBP5.51□□□□□ -1.53
HTT-212ENST00000513639 CCDC140Q96MF4 163 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 FUNDC2Q9BWH2 189 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 HINT2Q9BX68 163 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 C5orf66Q9H5L9 145 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 NDUFA4L2Q9NRX3 87 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 OR51B2Q9Y5P1 312 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 CEPT1Q9Y6K0 416 aa5.51□□□□□ -1.53
HTT-212ENST00000513639 CGB1A6NKQ9 187 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 A8MWP6 167 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 RLN1P04808 185 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 RPA2P15927 270 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 RCVRNP35243 200 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 G6PCP35575 357 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 TGFBR1P36897 503 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 CMC4P56277 68 aaPredicted RBP5.5□□□□□ -1.53
HTT-212ENST00000513639 WT1-ASQ06250 92 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 ZNF585BQ52M93 769 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 TM4SF20Q53R12 229 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 LINC00322Q6ZN03 302 aaPredicted RBP5.5□□□□□ -1.53
HTT-212ENST00000513639 H2BFWTQ7Z2G1 175 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 DEFB125Q8N687 156 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 OR10W1Q8NGF6 305 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 OR52B4Q8NGK2 314 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 OR1P1Q8NH06 330 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 TXN2Q99757 166 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 ZNF436Q9C0F3 470 aaPredicted RBP5.5□□□□□ -1.53
HTT-212ENST00000513639 EDA2RQ9HAV5 297 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 C21orf62Q9NYP8 219 aa5.5□□□□□ -1.53
HTT-212ENST00000513639 F11RQ9Y624 299 aaKnown RBP5.5□□□□□ -1.53
HTT-212ENST00000513639 CSMD3Q7Z407 3707 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 TMEM213A2RRL7 107 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 MFSD2BA6NFX1 497 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 OR2T8A6NH00 312 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 FAM25AB3EWG3 89 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 FAM25CB3EWG5 89 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms