RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 IGLV3-27P01718 113 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 CD2P06729 351 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 ELOCQ15369 112 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 LHFPL1Q86WI0 220 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 ZNF645Q8N7E2 425 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 OR5A1Q8NGJ0 315 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 OR10G8Q8NGN5 311 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 GPR146Q96CH1 333 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 STARD4Q96DR4 205 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 SLC35E1Q96K37 410 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 ATOH8Q96SQ7 321 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 TSSK6Q9BXA6 273 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 ZNF556Q9HAH1 456 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 OTORQ9NRC9 128 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 NEUROG3Q9Y4Z2 214 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 PCYT1BQ9Y5K3 369 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 KIAA0100Q14667 2235 aaKnown RBP4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 ZNF638Q14966 1978 aaKnown RBP4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 TRAV38-1A0A0B4J264 116 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 LOC389332A0A1B0GUA5 103 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 F5H5P2 479 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 MPGP29372 298 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 P2RX1P51575 399 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 C1orf100Q5SVJ3 147 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 FAM182AQ5T1J6 154 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 SLC25A45Q8N413 288 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 GEMIN6Q8WXD5 167 aaKnown RBP4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 C18orf15Q96N68 181 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 SFXN3Q9BWM7 321 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 ENPP4Q9Y6X5 453 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 PLXNA4Q9HCM2 1894 aa4.8□□□□□ -1.64
TRAPPC11-209ENST00000512476 IGHV3OR16-9A0A0B4J2B5 98 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 M0R129 80 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 OVOL1O14753 267 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 SCTP09683 121 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 CT45A10P0DMU9 189 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 S100A2P29034 98 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 INSL3P51460 131 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 GP2P55259 537 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 LY6DQ14210 128 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 NXNL2Q5VZ03 156 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 GLYATQ6IB77 296 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 CROCCP2Q86T23 111 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 CNBD2Q96M20 576 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 TAF9BQ9HBM6 251 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 IGLV3-10A0A075B6K4 115 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 ODAMA1E959 279 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 M0R381 172 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 NPFFO15130 113 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 MAS1P04201 325 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 SHBGP04278 402 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 HLA-DQB2P05538 268 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 ZNF404Q494X3 552 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 PCSK4Q6UW60 755 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 NTN5Q8WTR8 489 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 PHYHIPLQ96FC7 376 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 F2RL3Q96RI0 385 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 DEFB127Q9H1M4 99 aa4.79□□□□□ -1.64
TRAPPC11-209ENST00000512476 TRAV4A0A0B4J268 109 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 FAM236AA0A1B0GUQ0 79 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 FAM236BA0A1B0GV22 79 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 C5orf67F2Z3F1 127 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 LINC00313P59037 77 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 Q0VFX4 171 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 BATFQ16520 125 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 COL5A1-AS1Q5SY13 56 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 CMBLQ96DG6 245 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 TMEM243Q9BU79 118 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 NCKAP5O14513 1909 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 LY6LH3BQJ8 138 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 CRYBA1P05813 215 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 C17orf58Q2M2W7 97 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 LINC00476Q8WZB0 136 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 ATXN7L3BQ96GX2 97 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 NUFIP1Q9UHK0 495 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 HEBP2Q9Y5Z4 205 aa4.78□□□□□ -1.64
TRAPPC11-209ENST00000512476 IGHV6-1A0A0B4J1U7 121 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 MPTX1A8MV57 137 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 GZMBP10144 247 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 SPINK2P20155 84 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 CCR2P41597 374 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 MEF2BQ02080 365 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 KIAA0087Q14695 138 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 MSMO1Q15800 293 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 AVPI1Q5T686 147 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 TEX43Q6ZNM6 134 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 SHISA6Q6ZSJ9 500 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 SLC35E3Q7Z769 313 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 WDR86Q86TI4 376 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 LINC00596Q86U02 117 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 SAXO1Q8IYX7 474 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 OR11G2Q8NGC1 345 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 OR5AP2Q8NGF4 316 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 OR5K1Q8NHB7 308 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 DDB2Q92466 427 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 BORCS8Q96FH0 119 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 ST6GAL2Q96JF0 529 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 PAXXQ9BUH6 204 aa4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 MRPL20Q9BYC9 149 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-209ENST00000512476 SCP2D1Q9UJQ7 156 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms