RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	ZNF329	Q86UD4	541 aa		5.89	□□□□□ -1.47
NR1I3-231	ENST00000512340	ZNF695	Q8IW36	515 aa		5.89	□□□□□ -1.47
NR1I3-231	ENST00000512340	NOL4L	Q96MY1	436 aa	Predicted RBP	5.89	□□□□□ -1.47
NR1I3-231	ENST00000512340	CITED2	Q99967	270 aa	Predicted RBP	5.89	□□□□□ -1.47
NR1I3-231	ENST00000512340	RSRP1	Q9BUV0	290 aa		5.89	□□□□□ -1.47
NR1I3-231	ENST00000512340	COMMD5	Q9GZQ3	224 aa		5.89	□□□□□ -1.47
NR1I3-231	ENST00000512340	SEPSECS	Q9HD40	501 aa	Known RBP	5.89	□□□□□ -1.47
NR1I3-231	ENST00000512340	NUBP2	Q9Y5Y2	271 aa		5.89	□□□□□ -1.47
NR1I3-231	ENST00000512340	C13orf42	A0A1B0GVH6	325 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340		A0A1W2PN81	502 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340		A0A1W2PRX2	142 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	ANKRD20A5P	A0PJZ0	165 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	C9orf170	A2RU37	121 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	NAP1L6	A6NFF2	107 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	RBMXL2	O75526	392 aa	Known RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	KBTBD11	O94819	623 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	DUS4L	O95620	317 aa	Known RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	CTSD	P07339	412 aa	Predicted RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	SAA1	P0DJI8	122 aa	Predicted RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	CHRNA7	P36544	502 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	RPL27A	P46776	148 aa	Known RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	CDX1	P47902	265 aa	Predicted RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	PIGP	P57054	158 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	DEFA1	P59665	94 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	DEFA3	P59666	94 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	RND3	P61587	244 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	RPL23A	P62750	156 aa	Known RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	SRPX	P78539	464 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	DHODH	Q02127	395 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	BTN1A1	Q13410	526 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	ZNF674	Q2M3X9	581 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	PHLDA2	Q53GA4	152 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	CLLU1	Q5K131	121 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340		Q6ZS46	218 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	H2BFWT	Q7Z2G1	175 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	REC114	Q7Z4M0	266 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	TBC1D26	Q86UD7	250 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	CCDC190	Q86UF4	302 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	TCTE3	Q8IZS6	198 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	EIF4E3	Q8N5X7	224 aa	Known RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	FAM110D	Q8TAY7	271 aa	Predicted RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	TMEM167A	Q8TBQ9	72 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	DPF1	Q92782	380 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	RRNAD1	Q96FB5	475 aa	Known RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	ST6GAL2	Q96JF0	529 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	RITA1	Q96K30	269 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	HSPB9	Q9BQS6	159 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	SLC25A21	Q9BQT8	299 aa	Predicted RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	SRSF8	Q9BRL6	282 aa	Known RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	MCRIP2	Q9BUT9	160 aa	Known RBP	5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	SLC2A9	Q9NRM0	540 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	MED9	Q9NWA0	146 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	BET1L	Q9NYM9	111 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	LINC00527	Q9UJ94	153 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	PRND	Q9UKY0	176 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	VSIG4	Q9Y279	399 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	WSB1	Q9Y6I7	421 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	PKD1L1	Q8TDX9	2849 aa		5.88	□□□□□ -1.47
NR1I3-231	ENST00000512340	TNC	P24821	2201 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	NOTCH3	Q9UM47	2321 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	C3orf85	A0A1B0GTC6	90 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	SERTM2	A0A1B0GWG4	89 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	MSGN1	A6NI15	193 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340		H0Y980	276 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	MED6	O75586	246 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	IGLV2-14	P01704	120 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	IGLV2-23	P01705	113 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	OR9G9	P0C7N8	305 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	HIST1H1B	P16401	226 aa	Known RBP	5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	HLA-G	P17693	338 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	CD33	P20138	364 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	MYCNOS	P40205	109 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	LPAR6	P43657	344 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	RAB9A	P51151	201 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	RAB25	P57735	213 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	RPL30	P62888	115 aa	Known RBP	5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	SRSF4	Q08170	494 aa	Known RBP	5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	GAGE1	Q13065	139 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	BAK1	Q16611	211 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	POU2AF1	Q16633	256 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	PDLIM3	Q53GG5	364 aa	Predicted RBP	5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	DNLZ	Q5SXM8	178 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	SMIM15	Q7Z3B0	74 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	LHFPL1	Q86WI0	220 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	SGPP2	Q8IWX5	399 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	KLHL30-AS1	Q8NEE0	82 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	LFNG	Q8NES3	379 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	OR51S1	Q8NGJ8	323 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	OR4C16	Q8NGL9	310 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	OR4A16	Q8NH70	328 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	WIPF2	Q8TF74	440 aa	Predicted RBP	5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	SFT2D1	Q8WV19	159 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	SRSF12	Q8WXF0	261 aa	Known RBP	5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	UBE2E2	Q96LR5	201 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	TMEM56	Q96MV1	263 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	PFDN5	Q99471	154 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	SOST	Q9BQB4	213 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	C7orf50	Q9BRJ6	194 aa	Known RBP	5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	FXYD6	Q9H0Q3	95 aa		5.87	□□□□□ -1.47
NR1I3-231	ENST00000512340	ZNF430	Q9H8G1	570 aa	Predicted RBP	5.87	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms