RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ZNF525Q8N782 197 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 CCL19Q99731 98 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 COL25A1Q9BXS0 654 aaPredicted RBP10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 EGR1P18146 543 aa10.9□□□□□ -0.66
PCDHA4-202ENST00000512229 STPG3Q8N7X2 389 aa10.9□□□□□ -0.66
PCDHA4-202ENST00000512229 C19orf24Q9BVV8 132 aa10.9□□□□□ -0.66
PCDHA4-202ENST00000512229 TMEM133Q9H2Q1 129 aa10.9□□□□□ -0.66
PCDHA4-202ENST00000512229 PITPNC1Q9UKF7 332 aa10.9□□□□□ -0.66
PCDHA4-202ENST00000512229 MFAP4P55083 255 aa10.9□□□□□ -0.66
PCDHA4-202ENST00000512229 SGMS2Q8NHU3 365 aa10.9□□□□□ -0.66
PCDHA4-202ENST00000512229 PRR14LQ5THK1 2151 aa10.9□□□□□ -0.67
PCDHA4-202ENST00000512229 A0A1W2PNU3 283 aaPredicted RBP10.9□□□□□ -0.67
PCDHA4-202ENST00000512229 ARL14EPLP0DKL9 152 aa10.9□□□□□ -0.67
PCDHA4-202ENST00000512229 CA7P43166 264 aa10.9□□□□□ -0.67
PCDHA4-202ENST00000512229 ADIPOQQ15848 244 aa10.9□□□□□ -0.67
PCDHA4-202ENST00000512229 ZNF672Q499Z4 452 aaPredicted RBP10.9□□□□□ -0.67
PCDHA4-202ENST00000512229 NUP37Q8NFH4 326 aa10.9□□□□□ -0.67
PCDHA4-202ENST00000512229 OR51G1Q8NGK1 321 aa10.9□□□□□ -0.67
PCDHA4-202ENST00000512229 COQ2Q96H96 371 aa10.9□□□□□ -0.67
PCDHA4-202ENST00000512229 FAM103A1Q9BTL3 118 aaKnown RBP10.9□□□□□ -0.67
PCDHA4-202ENST00000512229 IGF2RP11717 2491 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 PIEZO2Q9H5I5 2752 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 A8MXK9 166 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 AP4M1O00189 453 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 PRR30Q53SZ7 412 aaPredicted RBP10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 WDR73Q6P4I2 378 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 BPIFA4PQ86YQ2 179 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 IGKV3-7A0A075B6H7 116 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 TMEM178BH3BS89 294 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 P01737 135 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 HEPN1Q6WQI6 88 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 C20orf204Q6ZNR8 217 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 OR10D4PQ8NGN7 298 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 IFI27L2Q9H2X8 130 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 NPIPB11E5RHQ5 1161 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 IGLV3-1P01715 115 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 FABP4P15090 132 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 COX19Q49B96 90 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 DOCK11Q5JSL3 2073 aa10.89□□□□□ -0.67
PCDHA4-202ENST00000512229 A1L4Q6 167 aa10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 DNASE2O00115 360 aaPredicted RBP10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 SAA1P0DJI8 122 aaPredicted RBP10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 CEACAM8P31997 349 aaPredicted RBP10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 ST6GALNAC3Q8NDV1 305 aa10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 IGKV1D-17A0A075B6S4 117 aa10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 PGPA6NDG6 321 aa10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 UPK2O00526 184 aa10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 PF4V1P10720 104 aa10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 TLN1Q9Y490 2541 aaKnown RBP10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 ADAMTS9Q9P2N4 1935 aa10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 TMEM250H0YL14 139 aa10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 NMSQ5H8A3 153 aa10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 FAM168AQ92567 244 aa10.88□□□□□ -0.67
PCDHA4-202ENST00000512229 ELOA3CA0A087WX78 387 aaPredicted RBP10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 THBDP07204 575 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 HIST1H1EP10412 219 aaKnown RBP10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 RPL30P62888 115 aaKnown RBP10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 PRB3Q04118 309 aaPredicted RBP10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 RNF166Q96A37 237 aaPredicted RBP10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 CHODLQ9H9P2 273 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 HSPB7Q9UBY9 170 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 TRAV30A0A087WSZ9 112 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 CD55P08174 381 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 TPPP2P59282 170 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 TFF3Q07654 80 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 HERPUD1Q15011 391 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 CACNG8Q8WXS5 425 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 TMPRSS5Q9H3S3 457 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 IGHV3OR16-10A0A075B7F0 116 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 IGKV1D-33P01593 117 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 IGKV1-33P01594 117 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 IL6RP08887 468 aaPredicted RBP10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 FAM215AQ9Y5M1 114 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 C15orf61A6NNL5 157 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 PHOX2AO14813 284 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 CRISP2P16562 243 aa10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 FCGR2BP31994 310 aaPredicted RBP10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 MRPL54Q6P161 138 aaKnown RBP10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 NOL4LQ96MY1 436 aaPredicted RBP10.87□□□□□ -0.67
PCDHA4-202ENST00000512229 YLPM1P49750 1951 aaKnown RBP10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 HIST1H1BP16401 226 aaKnown RBP10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 ZNF506Q5JVG8 444 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 MBNL3Q9NUK0 354 aaKnown RBP10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 PTPRSQ13332 1948 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 SEC14L6B5MCN3 397 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 IGFBP2P18065 325 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 KRTDAPP60985 99 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 NHLH1Q02575 133 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 IGFL2Q6UWQ7 119 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 EIF4E3Q8N5X7 224 aaKnown RBP10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 PARLQ9H300 379 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 OR51M1Q9H341 326 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 PCNX3Q9H6A9 2034 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 C10orf142B7Z368 130 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 RRHO14718 337 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 GCHFRP30047 84 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 LOXL3P58215 753 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 ZNF705AQ6ZN79 300 aaPredicted RBP10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 SRD5A3Q9H8P0 318 aa10.86□□□□□ -0.67
PCDHA4-202ENST00000512229 FUT9Q9Y231 359 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms