RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TMEM100Q9NV29 134 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 CCDC167Q9P0B6 97 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 INSIG2Q9Y5U4 225 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 TNRC6AQ8NDV7 1962 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 MSGN1A6NI15 193 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 H7C1H1 209 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 GNGT2O14610 69 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF432O94892 652 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 CLDN14O95500 239 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 PGA4P0DJD7 388 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 PGA3P0DJD8 388 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 PGA5P0DJD9 388 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 FGF6P10767 208 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 LAMP1P11279 417 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 HOXB6P17509 224 aaKnown RBP4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 BTCP35070 178 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 SOX3P41225 446 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 TFPI2P48307 235 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 CTBP2P56545 445 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 PSG7Q13046 419 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 CEACAM16Q2WEN9 425 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 SPINK14Q6IE38 97 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 SLC35E3Q7Z769 313 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 EXOC3-AS1Q8N2X6 119 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 APCDD1LQ8NCL9 501 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR4S1Q8NGB4 309 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 PSMF1Q92530 271 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 TMEM54Q969K7 222 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 ACY3Q96HD9 319 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 DPY30Q9C005 99 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 TMEM222Q9H0R3 208 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 MRPL18Q9H0U6 180 aaKnown RBP4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 MMP26Q9NRE1 261 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 NAT8Q9UHE5 227 aa4.09□□□□□ -1.75
TRAPPC11-208ENST00000511955 FASNP49327 2511 aaKnown RBP4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 A0A0A6YYD4 124 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 IFITM5A6NNB3 132 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 FXYD1O00168 92 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 NDUFS7O75251 213 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 CPSF4O95639 269 aaKnown RBP4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 PTHP01270 115 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 MAS1P04201 325 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR5AC1P0C628 307 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 FAM106CPP0CH98 169 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 GZMBP10144 247 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 FABP4P15090 132 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 BCL3P20749 454 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 GPR6P46095 362 aaPredicted RBP4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 FAM106AQ4KMX7 169 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 SPANXN4Q5MJ08 99 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 PRR31Q5SQ13 230 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF788Q6ZQV5 615 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 RPS19BP1Q86WX3 136 aaKnown RBP4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 C9orf40Q8IXQ3 194 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 CLECL1Q8IZS7 167 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 TMEM229BQ8NBD8 167 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR52R1Q8NGF1 315 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR51G1Q8NGK1 321 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 MGLLQ99685 303 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 HSD17B10Q99714 261 aaKnown RBP4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 RPS10P5Q9NQ39 176 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 NTMQ9P121 344 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 RPS6KB2Q9UBS0 482 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 KLK11Q9UBX7 282 aa4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 BOKQ9UMX3 212 aaPredicted RBP4.09□□□□□ -1.76
TRAPPC11-208ENST00000511955 CENPEQ02224 2701 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 TRGV11A0A075B6L2 103 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 IGHV2OR16-5A0A0B4J2B6 119 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 LOC107984640A0A0U1RRK4 108 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNHIT1O43257 154 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 ARL6IP5O75915 188 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR2A4O95047 310 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 SOD3P08294 240 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 RBMY1CP0DJD4 496 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 SAA4P35542 130 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 LHX2P50458 406 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 AKR1C2P52895 323 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 RPL24P83731 157 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 AKR1C1Q04828 323 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 TMEM241Q24JQ0 296 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 MORN2Q502X0 79 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 PRR30Q53SZ7 412 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 C1QL3Q5VWW1 255 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 RPL22L1Q6P5R6 122 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 C1orf229Q6ZS94 237 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 PPP1R27Q86WC6 154 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR11H6Q8NGC7 330 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR51A4Q8NGJ6 313 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR1J4Q8NGS1 313 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR1L1Q8NH94 360 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 C8orf46Q8TAG6 207 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF721Q8TF20 911 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 POP5Q969H6 163 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 GPR146Q96CH1 333 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 C4orf45Q96LM5 186 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 C2orf48Q96LS8 159 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 SIGLEC12Q96PQ1 595 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR2A7Q96R45 310 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 ESM1Q9NQ30 184 aa4.08□□□□□ -1.76
TRAPPC11-208ENST00000511955 TMEM45AQ9NWC5 275 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms