RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 SORL1Q92673 2214 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 TEX50A0A1B0GTY4 177 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 IGLC7A0M8Q6 106 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 CGB1A6NKQ9 187 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 DISC1C4P0D8 188 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 BMPR1BO00238 502 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 CTDSPLO15194 276 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 NDUFB8O95169 186 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 OR13C7P0DN81 318 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 GP9P14770 177 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 PI3P19957 117 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 MECP2P51608 486 aaKnown RBP12.9□□□□□ -0.34
SMN2-210ENST00000511812 RND3P61587 244 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 H2BFWTQ7Z2G1 175 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 OR4D10Q8NGI6 311 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 OR4A16Q8NH70 328 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 MCFD2Q8NI22 146 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 CXorf58Q96LI9 332 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 TMEM56Q96MV1 263 aa12.9□□□□□ -0.34
SMN2-210ENST00000511812 RSL24D1Q9UHA3 163 aaKnown RBP12.9□□□□□ -0.34
SMN2-210ENST00000511812 LSM4Q9Y4Z0 139 aaKnown RBP12.9□□□□□ -0.34
SMN2-210ENST00000511812 IGLV11-55A0A075B6I3 123 aa12.89□□□□□ -0.35
SMN2-210ENST00000511812 GGCTO75223 188 aaKnown RBP12.89□□□□□ -0.35
SMN2-210ENST00000511812 IGLV1-51P01701 117 aa12.89□□□□□ -0.35
SMN2-210ENST00000511812 IGHV3-23P01764 117 aa12.89□□□□□ -0.35
SMN2-210ENST00000511812 AKAIN1P0CW23 69 aa12.89□□□□□ -0.35
SMN2-210ENST00000511812 PTBP1P26599 531 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMN2-210ENST00000511812 CLEC19AQ6UXS0 136 aa12.89□□□□□ -0.35
SMN2-210ENST00000511812 OR10W1Q8NGF6 305 aa12.89□□□□□ -0.35
SMN2-210ENST00000511812 OR5B3Q8NH48 314 aa12.89□□□□□ -0.35
SMN2-210ENST00000511812 LSM10Q969L4 123 aaKnown RBP12.89□□□□□ -0.35
SMN2-210ENST00000511812 SLIRPQ9GZT3 109 aaKnown RBP12.89□□□□□ -0.35
SMN2-210ENST00000511812 SMAD5-AS1Q9Y6J3 95 aa12.89□□□□□ -0.35
SMN2-210ENST00000511812 CEPT1Q9Y6K0 416 aa12.89□□□□□ -0.35
SMN2-210ENST00000511812 S4R3C0 116 aa12.89□□□□□ -0.35
SMN2-210ENST00000511812 TRBV7-1A0A0A6YYK4 115 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 FABP12A6NFH5 140 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 PPP5D1E7EU14 171 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 H0Y980 276 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 ATG12O94817 140 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 ARL3P36405 182 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 KLK9Q2XQG4 91 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 SLC25A24Q6NUK1 477 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 HAPLN4Q86UW8 402 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 GDPD1Q8N9F7 314 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 MRGPRFQ96AM1 343 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 SEC22AQ96IW7 307 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 NDUFA4L2Q9NRX3 87 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 KLK9Q9UKQ9 250 aa12.88□□□□□ -0.35
SMN2-210ENST00000511812 C14orf166Q9Y224 244 aaKnown RBP12.88□□□□□ -0.35
SMN2-210ENST00000511812 C3orf85A0A1B0GTC6 90 aa12.87□□□□□ -0.35
SMN2-210ENST00000511812 C15orf61A6NNL5 157 aa12.87□□□□□ -0.35
SMN2-210ENST00000511812 TNFSF8P32971 234 aa12.87□□□□□ -0.35
SMN2-210ENST00000511812 AKR1C2P52895 323 aa12.87□□□□□ -0.35
SMN2-210ENST00000511812 OR13C8Q8NGS7 320 aa12.87□□□□□ -0.35
SMN2-210ENST00000511812 MARCH1Q8TCQ1 289 aa12.87□□□□□ -0.35
SMN2-210ENST00000511812 OR2C1O95371 312 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 IGKV1-39P01597 117 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 IGKV1D-39P04432 117 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 CTSDP07339 412 aaPredicted RBP12.86□□□□□ -0.35
SMN2-210ENST00000511812 CSN3P07498 182 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 WT1-ASQ06250 92 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 TRIM16LQ309B1 348 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 FAM106AQ4KMX7 169 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 FAAP20Q6NZ36 180 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 OR1L6Q8NGR2 347 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 CCDC140Q96MF4 163 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 PRRT1Q99946 306 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 NXF2Q9GZY0 626 aaKnown RBP12.86□□□□□ -0.35
SMN2-210ENST00000511812 TMEM14BQ9NUH8 114 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 SIGLEC8Q9NYZ4 499 aa12.86□□□□□ -0.35
SMN2-210ENST00000511812 MFSD2BA6NFX1 497 aa12.85□□□□□ -0.35
SMN2-210ENST00000511812 GSTZ1O43708 216 aaPredicted RBP12.85□□□□□ -0.35
SMN2-210ENST00000511812 B3GALNT1O75752 331 aa12.85□□□□□ -0.35
SMN2-210ENST00000511812 HLA-AP01891 365 aaKnown RBP12.85□□□□□ -0.35
SMN2-210ENST00000511812 CLEC3BP05452 202 aa12.85□□□□□ -0.35
SMN2-210ENST00000511812 S100A5P33763 92 aa12.85□□□□□ -0.35
SMN2-210ENST00000511812 SURF2Q15527 256 aaPredicted RBP12.85□□□□□ -0.35
SMN2-210ENST00000511812 LCN12Q6JVE5 192 aa12.85□□□□□ -0.35
SMN2-210ENST00000511812 IL34Q6ZMJ4 242 aa12.85□□□□□ -0.35
SMN2-210ENST00000511812 OR4C16Q8NGL9 310 aa12.85□□□□□ -0.35
SMN2-210ENST00000511812 RNASE11Q8TAA1 199 aaKnown RBP12.85□□□□□ -0.35
SMN2-210ENST00000511812 DYNLRB2Q8TF09 96 aa12.85□□□□□ -0.35
SMN2-210ENST00000511812 TP53RKQ96S44 253 aa12.85□□□□□ -0.35
SMN2-210ENST00000511812 F11RQ9Y624 299 aaKnown RBP12.85□□□□□ -0.35
SMN2-210ENST00000511812 TEX13DA0A0J9YY54 714 aaPredicted RBP12.84□□□□□ -0.35
SMN2-210ENST00000511812 ZNF320A2RRD8 509 aa12.84□□□□□ -0.35
SMN2-210ENST00000511812 NHLRC4P0CG21 123 aaPredicted RBP12.84□□□□□ -0.35
SMN2-210ENST00000511812 GPR183P32249 361 aa12.84□□□□□ -0.35
SMN2-210ENST00000511812 PLET1Q6UQ28 207 aa12.84□□□□□ -0.35
SMN2-210ENST00000511812 GPHB5Q86YW7 130 aa12.84□□□□□ -0.35
SMN2-210ENST00000511812 Q8N402 240 aa12.84□□□□□ -0.35
SMN2-210ENST00000511812 VN1R17PQ8TDU5 208 aa12.84□□□□□ -0.35
SMN2-210ENST00000511812 RRNAD1Q96FB5 475 aaKnown RBP12.84□□□□□ -0.35
SMN2-210ENST00000511812 PDCD10Q9BUL8 212 aa12.84□□□□□ -0.35
SMN2-210ENST00000511812 SCP2D1Q9UJQ7 156 aa12.84□□□□□ -0.35
SMN2-210ENST00000511812 ANKRD20A5PA0PJZ0 165 aa12.83□□□□□ -0.36
SMN2-210ENST00000511812 DBX1A6NMT0 343 aa12.83□□□□□ -0.36
SMN2-210ENST00000511812 LGALS9O00182 355 aa12.83□□□□□ -0.36
SMN2-210ENST00000511812 HSPE1P61604 102 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms