RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 MFSD4AQ8N468 514 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 TMEM116Q8NCL8 245 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 CENPOQ9BU64 300 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 RHPN1-AS1Q9BWJ2 59 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 BET1LQ9NYM9 111 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 IGHV7-4-1A0A0J9YVY3 117 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 C15orf61A6NNL5 157 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 C15orf62A8K5M9 175 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 K7EMT4 169 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 CHEK1O14757 476 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 SLC22A5O76082 557 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 IRF3Q14653 427 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 Q56UQ5 140 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 Q6ZS49 121 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 ZNF767PQ75MW2 155 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 C10orf67Q8IYJ2 551 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 C8orf59Q8N0T1 100 aaPredicted RBP9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 DHRSXQ8N5I4 330 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 GDPD1Q8N9F7 314 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 UFD1Q92890 307 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 CMTM3Q96MX0 182 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 RNF126Q9BV68 326 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 QTRT1Q9BXR0 403 aaKnown RBP9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 COMMD5Q9GZQ3 224 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 C21orf62Q9NYP8 219 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 V9GY05 133 aa9.59□□□□□ -0.87
POLR2J3-216ENST00000511773 IGLV2-18A0A075B6J9 118 aa9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 ARL6IP5O75915 188 aa9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 YIF1AO95070 293 aa9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 HSMCR30P0CW71 290 aa9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 P0DMU3 169 aa9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 FAM231AP0DMU4 169 aa9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 FAM231CP0DMU5 169 aa9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 OR13C7P0DN81 318 aa9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 SCARB1Q8WTV0 552 aa9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 GIMAP1Q8WWP7 306 aa9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 FKBP14Q9NWM8 211 aa9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 LSM2Q9Y333 95 aaKnown RBP9.58□□□□□ -0.88
POLR2J3-216ENST00000511773 ELOA3CA0A087WX78 387 aaPredicted RBP9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 DEFB131BA0A096LNP1 70 aa9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 F8W735 103 aaPredicted RBP9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 UPK2O00526 184 aa9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 AMBPP02760 352 aa9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 DEFB131AP59861 70 aa9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 WT1-ASQ06250 92 aa9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 SSX1Q16384 188 aa9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 ZNF66Q6ZN08 573 aa9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 SPAG16Q8N0X2 631 aa9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 SCRT1Q9BWW7 348 aa9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 HINT2Q9BX68 163 aa9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 PLCXD1Q9NUJ7 323 aa9.57□□□□□ -0.88
POLR2J3-216ENST00000511773 AGRNO00468 2067 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 PTGES3LE9PB15 166 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 SULT1C2O00338 296 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 NUPL2O15504 423 aaKnown RBP9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 SERPINE2P07093 398 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 CTXN2P0C2S0 81 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 MIFP14174 115 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 DTYMKP23919 212 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 OR10A3P58181 314 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 PAFAH1B2P68402 229 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 LGALS9BQ3B8N2 356 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 TCF24Q7RTU0 167 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 STHQ8IWL8 128 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 MAPKAPK5-AS1Q8N8E1 139 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 DMBX1Q8NFW5 382 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 SECTM1Q8WVN6 248 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 SRSF8Q9BRL6 282 aaKnown RBP9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 AIFM2Q9BRQ8 373 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 NDUFAF3Q9BU61 184 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 ATG5Q9H1Y0 275 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 TMEM140Q9NV12 185 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 CELA1Q9UNI1 258 aa9.56□□□□□ -0.88
POLR2J3-216ENST00000511773 K7EIM0 57 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 DNASE2O00115 360 aaPredicted RBP9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 GIG44P09565 113 aaPredicted RBP9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 TRAPPC2P0DI81 140 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 TRAPPC2BP0DI82 140 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 RANBP1P43487 201 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 TAS2R31P59538 309 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 RELQ04864 619 aaPredicted RBP9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 FAM90A2PQ658T7 463 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 UBE2DNLQ8IWF7 75 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 FAM24BQ8N5W8 94 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 NUDCD2Q8WVJ2 157 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 ZNF414Q96IQ9 312 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 MS4A6AQ9H2W1 248 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 CCL28Q9NRJ3 127 aa9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 F11RQ9Y624 299 aaKnown RBP9.55□□□□□ -0.88
POLR2J3-216ENST00000511773 TRAV14DV4A0A0A6YYC5 116 aa9.54□□□□□ -0.88
POLR2J3-216ENST00000511773 IGHV3-66A0A0C4DH42 116 aa9.54□□□□□ -0.88
POLR2J3-216ENST00000511773 METTL21EPA6NDL7 271 aa9.54□□□□□ -0.88
POLR2J3-216ENST00000511773 ERICH4A6NGS2 130 aa9.54□□□□□ -0.88
POLR2J3-216ENST00000511773 IFNA10P01566 189 aa9.54□□□□□ -0.88
POLR2J3-216ENST00000511773 CTSGP08311 255 aa9.54□□□□□ -0.88
POLR2J3-216ENST00000511773 NQO2P16083 231 aa9.54□□□□□ -0.88
POLR2J3-216ENST00000511773 RAB6AP20340 208 aa9.54□□□□□ -0.88
POLR2J3-216ENST00000511773 C4BPBP20851 252 aa9.54□□□□□ -0.88
POLR2J3-216ENST00000511773 RPL11P62913 178 aaKnown RBP9.54□□□□□ -0.88
POLR2J3-216ENST00000511773 FABP5Q01469 135 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms