RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SFXN4Q6P4A7 337 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 FAM173BQ6P4H8 233 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 DYNAPQ8N1N2 210 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 OPTNQ96CV9 577 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 EFCAB1Q9HAE3 211 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 IL36BQ9NZH7 164 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 GUCA1BQ9UMX6 200 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 SCAF11Q99590 1463 aaKnown RBP1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 A0A0J9YY10 115 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 A0A1B0GX78 115 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 KCNK1O00180 336 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 SDCBPO00560 298 aaPredicted RBP1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 IFNA5P01569 189 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 ANGP03950 147 aaKnown RBP1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 RPSAP08865 295 aaKnown RBP1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 UBBP0CG47 229 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 LYNX1P0DP58 116 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 FGF6P10767 208 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 RPL18Q07020 188 aaKnown RBP1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 PMAIP1Q13794 54 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 GUK1Q16774 197 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 CCDC122Q5T0U0 273 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 OR8B3Q8NGG8 313 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 OR2T4Q8NH00 348 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 KLK6Q92876 244 aa1.1□□□□□ -2.23
TRAPPC11-207ENST00000511409 DCCP43146 1447 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 PCDH15Q96QU1 1955 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 IGKV2-40A0A087WW87 121 aaPredicted RBP1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 TGIF2-C20orf24A0A0A6YYL0 155 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 TRBV10-2A0A0K0K1G8 114 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 IRGMA1A4Y4 181 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 FABP5P3A8MUU1 101 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 EEF1E1-BLOC1S5C9J1V9 151 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 IGKV2D-40P01614 121 aaPredicted RBP1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 PRM2P04554 102 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 RPS4Y1P22090 263 aaKnown RBP1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 NFYAP23511 347 aaPredicted RBP1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 NKX2-5P52952 324 aaPredicted RBP1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 SPCS3P61009 180 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 MCFD2Q8NI22 146 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 WDR61Q9GZS3 305 aaKnown RBP1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 CISHQ9NSE2 258 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 CMTM6Q9NX76 183 aa1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 SOX21Q9Y651 276 aaPredicted RBP1.09□□□□□ -2.23
TRAPPC11-207ENST00000511409 ZFHX2Q9C0A1 2572 aaPredicted RBP1.09□□□□□ -2.24
TRAPPC11-207ENST00000511409 KIF24Q5T7B8 1368 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 FREM1Q5H8C1 2179 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 RP1L1Q8IWN7 2480 aaPredicted RBP1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 IGKV3D-7A0A0C4DH55 119 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 IGKV3OR2-268A0A0C4DH90 116 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 PMP2P02689 132 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 C1QAP02745 245 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 METTL15P1P0C7V9 234 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 ARL14EPLP0DKL9 152 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 HIST1H1EP10412 219 aaKnown RBP1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 SUPT4H1P63272 117 aaKnown RBP1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 CDK5R1Q15078 307 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 Q1T7F1 81 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 PTRHD1Q6GMV3 140 aaKnown RBP1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 Q6ZS49 121 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 IQCF2Q8IXL9 164 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 WFDC11Q8NEX6 87 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 C10orf105Q8TEF2 133 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 SLC35B4Q969S0 331 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 ARL5BQ96KC2 179 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 BAIAP2Q9UQB8 552 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 HEATR5AQ86XA9 2040 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 MAP3K5Q99683 1374 aa1.08□□□□□ -2.24
TRAPPC11-207ENST00000511409 RALGAPA2Q2PPJ7 1873 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 TRAPPC13A5PLN9 417 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 SMIM23A6NLE4 172 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 TMEM212A6NML5 194 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 M0R036 132 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 PSMD12O00232 456 aaPredicted RBP1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 NIPSNAP2O75323 286 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 AHSA1O95433 338 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 OR5G3P0C626 314 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 CD79AP11912 226 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 HIST1H2BOP23527 126 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 HIST1H2BBP33778 126 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 FXYD2P54710 66 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 HIST1H2BDP58876 126 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 HIST1H2BCP62807 126 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 CCL20P78556 96 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 IFITM2Q01629 132 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 SURF2Q15527 256 aaPredicted RBP1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 HIST3H3Q16695 136 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 HIST2H2BEQ16778 126 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 AADACL3Q5VUY0 350 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 AAED1Q7RTV5 226 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 DCXRQ7Z4W1 244 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 DHFR2Q86XF0 187 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 MRPL30Q8TCC3 161 aaKnown RBP1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 HIST1H2BHQ93079 126 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 TMEM106AQ96A25 262 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 HIST1H2BNQ99877 126 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 HIST1H2BMQ99879 126 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 ADAT1Q9BUB4 502 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms