RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 TMEM250H0YL14 139 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 YIF1AO95070 293 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 IFNA4P05014 189 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 SNRNP70P08621 437 aaKnown RBP3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 FBP1P09467 338 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 LYNX1P0DP58 116 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 RNASE2P10153 161 aaKnown RBP3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 MYOD1P15172 320 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 USF1P22415 310 aaPredicted RBP3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 COL8A2P25067 703 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 AKR1C3P42330 323 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 REG1BP48304 166 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 CDC34P49427 236 aaPredicted RBP3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 RPL8P62917 257 aaKnown RBP3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 HLA-DRB5Q30154 266 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 C2orf83Q53S99 150 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 GCSAMLQ5JQS6 135 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 AVPI1Q5T686 147 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 FAM122CQ6P4D5 195 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 RBMS3Q6XE24 437 aaKnown RBP3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 TGIF2LXQ8IUE1 241 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 ABHD12Q8N2K0 398 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 BEND2Q8NDZ0 799 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 OR4C13Q8NGP0 309 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 OR1L8Q8NGR8 309 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 VSTM2AQ8TAG5 236 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 TMEM167AQ8TBQ9 72 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 RAB24Q969Q5 203 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 C1orf159Q96HA4 380 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 YPEL4Q96NS1 127 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 NIPSNAP3BQ9BS92 247 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 C20orf24Q9BUV8 137 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 RAB1BQ9H0U4 201 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 NDUFA4L2Q9NRX3 87 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 SLC39A9Q9NUM3 307 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 FKBP11Q9NYL4 201 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 VAX2Q9UIW0 290 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 RALYQ9UKM9 306 aaKnown RBP3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 PUS1Q9Y606 427 aaKnown RBP eCLIP3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 NBASA2RRP1 2371 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 CHD8Q9HCK8 2581 aa3.86□□□□□ -1.79
PDLIM5-214ENST00000510099 A0A1W2PN81 502 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 A0A1W2PPH5 198 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 TMEM8BA6NDV4 472 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 C22orf46C9J442 243 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 CYB5BO43169 146 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 EIF3GO75821 320 aaKnown RBP eCLIP3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 IGLV1-47P01700 117 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 MT-ND4LP03901 98 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 SOD3P08294 240 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 DEFA4P12838 97 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 AGAP20933 346 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 MAS1LP35410 378 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 CHRNA7P36544 502 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 PLA2G5P39877 138 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 RPL29P47914 159 aaKnown RBP3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 PSMB3P49720 205 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 CEBPGP53567 150 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 CD81P60033 236 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 B2MP61769 119 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 MEF2BQ02080 365 aaPredicted RBP3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 PNRC1Q12796 327 aaPredicted RBP3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 LY6DQ14210 128 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 DIAPH2-AS1Q14236 149 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 HABP2Q14520 560 aaPredicted RBP3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 HNF4GQ14541 408 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 VMA21Q3ZAQ7 101 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 AKIRIN2Q53H80 203 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 MIC13Q5XKP0 118 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 WDR25Q64LD2 544 aaPredicted RBP3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 CYP2G1PQ6ZSU1 146 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 STPG3Q8N7X2 389 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 LY6G5BQ8NDX9 201 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 OR8B3Q8NGG8 313 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 OR4P4Q8NGL7 312 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 NEU4Q8WWR8 484 aaPredicted RBP3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 FLYWCH2Q96CP2 140 aaKnown RBP3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 MALSU1Q96EH3 234 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 TVP23CQ96ET8 276 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 TIMD4Q96H15 378 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 OR8B2Q96RD0 313 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 HINT2Q9BX68 163 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 CLEC7AQ9BXN2 247 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 TMPRSS5Q9H3S3 457 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 SIRT7Q9NRC8 400 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 MIOXQ9UGB7 285 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 MLXQ9UH92 298 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 AMMECR1Q9Y4X0 333 aaPredicted RBP3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 PXMP4Q9Y6I8 212 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 ADGRG4Q8IZF6 3080 aa3.85□□□□□ -1.79
PDLIM5-214ENST00000510099 PKD1L2Q7Z442 2459 aa3.84□□□□□ -1.79
PDLIM5-214ENST00000510099 PPIAL4CA0A0B4J2A2 164 aa3.84□□□□□ -1.79
PDLIM5-214ENST00000510099 hCG_1809904A0A1W2PP81 198 aa3.84□□□□□ -1.79
PDLIM5-214ENST00000510099 A0A1W2PPR1 153 aa3.84□□□□□ -1.79
PDLIM5-214ENST00000510099 A0A1W2PR64 198 aa3.84□□□□□ -1.79
PDLIM5-214ENST00000510099 A0A1W2PRV1 198 aa3.84□□□□□ -1.79
PDLIM5-214ENST00000510099 CXorf65A6NEN9 183 aa3.84□□□□□ -1.79
PDLIM5-214ENST00000510099 CGB1A6NKQ9 187 aa3.84□□□□□ -1.79
PDLIM5-214ENST00000510099 B4DEV8 164 aa3.84□□□□□ -1.79
PDLIM5-214ENST00000510099 LY6LH3BQJ8 138 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms