RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 RAMP1O60894 148 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 ARL6IP5O75915 188 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 NUDT14O95848 222 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 NCR2O95944 276 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 HRASP01112 189 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 KRASP01116 189 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 WNT1P04628 370 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 LINC00032P0C843 101 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 ZNF705DP0CH99 300 aaPredicted RBP3.61□□□□□ -1.83
NIPBL-206ENST00000509429 ZNF705BP0CI00 300 aaPredicted RBP3.61□□□□□ -1.83
NIPBL-206ENST00000509429 RPS4Y1P22090 263 aaKnown RBP3.61□□□□□ -1.83
NIPBL-206ENST00000509429 PSMB9P28065 219 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 CDKN2AP42771 156 aaKnown RBP3.61□□□□□ -1.83
NIPBL-206ENST00000509429 SUB1P53999 127 aaKnown RBP eCLIP3.61□□□□□ -1.83
NIPBL-206ENST00000509429 SUMO2P61956 95 aaKnown RBP3.61□□□□□ -1.83
NIPBL-206ENST00000509429 CX3CL1P78423 397 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 IL15RAQ13261 267 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 KIAA1644Q3SXP7 199 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 LRRC37A5PQ49AS3 106 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 LCN12Q6JVE5 192 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 MRPL54Q6P161 138 aaKnown RBP3.61□□□□□ -1.83
NIPBL-206ENST00000509429 LHFPL1Q86WI0 220 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 PRR22Q8IZ63 422 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 ZFP62Q8NB50 900 aaPredicted RBP3.61□□□□□ -1.83
NIPBL-206ENST00000509429 OR11H7Q8NGC8 314 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 OR4C16Q8NGL9 310 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 OR4A5Q8NH83 315 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 PRSS3P2Q8NHM4 247 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 RTN4IP1Q8WWV3 396 aaPredicted RBP3.61□□□□□ -1.83
NIPBL-206ENST00000509429 YPEL2Q96QA6 119 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 SNRNP25Q9BV90 132 aaKnown RBP3.61□□□□□ -1.83
NIPBL-206ENST00000509429 ARRDC1-AS1Q9H2J1 176 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 ZNF331Q9NQX6 463 aaPredicted RBP3.61□□□□□ -1.83
NIPBL-206ENST00000509429 TVP23BQ9NYZ1 205 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 CCDC167Q9P0B6 97 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 TAAR2Q9P1P5 351 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 FUT9Q9Y231 359 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 TPRKBQ9Y3C4 175 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 PAM16Q9Y3D7 125 aa3.61□□□□□ -1.83
NIPBL-206ENST00000509429 DOCK1Q14185 1865 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 hCG_1818297A0A087WSY0 165 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 A0A087WWC5 75 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 A0A0G2JND7 137 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 A0A1B0GWB2 263 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 A1L4Q6 167 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 VWC2LB2RUY7 222 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 LY6LH3BQJ8 138 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 PIRO00625 290 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 EPPINO95925 133 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 IGKV1D-16P01601 117 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 APOHP02749 345 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-206ENST00000509429 ATP5G1P05496 136 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 SEC11BP0C7V7 166 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 PGA4P0DJD7 388 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 IGLC2P0DOY2 106 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 IGLC3P0DOY3 106 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 PSMB8P28062 276 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 OPRK1P41145 380 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 FOXA3P55318 350 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-206ENST00000509429 H2BFSP57053 126 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 SEC61A1P61619 476 aaKnown RBP3.6□□□□□ -1.83
NIPBL-206ENST00000509429 DAZ2Q13117 558 aaKnown RBP3.6□□□□□ -1.83
NIPBL-206ENST00000509429 DAZAP2Q15038 168 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-206ENST00000509429 C12orf74Q32Q52 190 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 ZNF506Q5JVG8 444 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 OR4C11Q6IEV9 310 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 LCN15Q6UWW0 184 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 AMTNQ6UX39 209 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 ZNF793Q6ZN11 406 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 Q6ZUT4 128 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 Q75L30 129 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 DAZ4Q86SG3 579 aaKnown RBP3.6□□□□□ -1.83
NIPBL-206ENST00000509429 ATOH7Q8N100 152 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 TCEANCQ8N8B7 351 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 OR2T33Q8NG76 320 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 OR1J4Q8NGS1 313 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 OR2T6Q8NHC8 308 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 TWIST2Q8WVJ9 160 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 PITX2Q99697 317 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 PDFQ9HBH1 243 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 DAZ1Q9NQZ3 744 aaKnown RBP3.6□□□□□ -1.83
NIPBL-206ENST00000509429 DAZ3Q9NR90 486 aaKnown RBP3.6□□□□□ -1.83
NIPBL-206ENST00000509429 KCNIP2Q9NS61 270 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 IL36AQ9UHA7 158 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 PYGO1Q9Y3Y4 419 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 PARP14Q460N5 1801 aa3.6□□□□□ -1.83
NIPBL-206ENST00000509429 ZNF638Q14966 1978 aaKnown RBP3.6□□□□□ -1.83
NIPBL-206ENST00000509429 CHD3Q12873 2000 aaKnown RBP3.6□□□□□ -1.83
NIPBL-206ENST00000509429 RALGAPA2Q2PPJ7 1873 aa3.59□□□□□ -1.83
NIPBL-206ENST00000509429 MED19A0JLT2 244 aaPredicted RBP3.59□□□□□ -1.83
NIPBL-206ENST00000509429 TMEM262E9PQX1 116 aa3.59□□□□□ -1.83
NIPBL-206ENST00000509429 F5H5P2 479 aa3.59□□□□□ -1.83
NIPBL-206ENST00000509429 F8W1H4 67 aa3.59□□□□□ -1.83
NIPBL-206ENST00000509429 H7C1H1 209 aa3.59□□□□□ -1.83
NIPBL-206ENST00000509429 APOC4-APOC2K7ER74 178 aa3.59□□□□□ -1.83
NIPBL-206ENST00000509429 CDX4O14627 284 aaPredicted RBP3.59□□□□□ -1.83
NIPBL-206ENST00000509429 NPIPB7O75200 414 aa3.59□□□□□ -1.83
NIPBL-206ENST00000509429 OR2A4O95047 310 aa3.59□□□□□ -1.83
NIPBL-206ENST00000509429 SFT2D2O95562 160 aa3.59□□□□□ -1.83
NIPBL-206ENST00000509429 CYB5AP00167 134 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms