RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 OR13C7P0DN81 318 aa11.55□□□□□ -0.56
TPM3-219ENST00000509409 PTBP1P26599 531 aaKnown RBP eCLIP11.55□□□□□ -0.562e-9■■■■■ 36.6
TPM3-219ENST00000509409 GNRHRP30968 328 aa11.55□□□□□ -0.56
TPM3-219ENST00000509409 POU2AF1Q16633 256 aa11.55□□□□□ -0.56
TPM3-219ENST00000509409 TSPAN14Q8NG11 270 aa11.55□□□□□ -0.56
TPM3-219ENST00000509409 OR10W1Q8NGF6 305 aa11.55□□□□□ -0.56
TPM3-219ENST00000509409 ZNF502Q8TBZ5 544 aa11.55□□□□□ -0.56
TPM3-219ENST00000509409 COMMD9Q9P000 198 aa11.55□□□□□ -0.56
TPM3-219ENST00000509409 UFC1Q9Y3C8 167 aa11.55□□□□□ -0.56
TPM3-219ENST00000509409 TEX50A0A1B0GTY4 177 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 A8MWP6 167 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 PGLYRP1O75594 196 aaPredicted RBP11.54□□□□□ -0.56
TPM3-219ENST00000509409 JTBO76095 146 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 RLN1P04808 185 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 TGFBR1P36897 503 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 LPAR6P43657 344 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 LSM3P62310 102 aaKnown RBP11.54□□□□□ -0.56
TPM3-219ENST00000509409 KCTD21Q4G0X4 260 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 UBE2NLQ5JXB2 153 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 TMEM69Q5SWH9 247 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 DHRS11Q6UWP2 260 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 UNQ9165/PRO28630Q6UXU0 137 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 OR1L8Q8NGR8 309 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 OR5H2Q8NGV7 314 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 MARC2Q969Z3 335 aa11.54□□□□□ -0.56
TPM3-219ENST00000509409 MRPL27Q9P0M9 148 aaKnown RBP11.54□□□□□ -0.56
TPM3-219ENST00000509409 LOC102724200A0A096LPH7 203 aaPredicted RBP11.53□□□□□ -0.56
TPM3-219ENST00000509409 IGHV3-21A0A0B4J1V1 117 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 OR2T8A6NH00 312 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 SNAPC5O75971 98 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 KRASP01116 189 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 F2RP25116 425 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 RPS19P39019 145 aaKnown RBP11.53□□□□□ -0.56
TPM3-219ENST00000509409 TAS2R20P59543 309 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 THOC7Q6I9Y2 204 aaKnown RBP11.53□□□□□ -0.56
TPM3-219ENST00000509409 HSD17B13Q7Z5P4 300 aaPredicted RBP11.53□□□□□ -0.56
TPM3-219ENST00000509409 CMTM1Q8IZ96 169 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 SLC38A6Q8IZM9 456 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 SAMD12Q8N8I0 201 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 OR1L6Q8NGR2 347 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 VN1R17PQ8TDU5 208 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 NSG2Q9Y328 171 aa11.53□□□□□ -0.56
TPM3-219ENST00000509409 TRAV25A0A0B4J276 109 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 MARCH11A6NNE9 402 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 TGOLN2O43493 480 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 SERPINE2P07093 398 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 C8orf88P0DMB2 117 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 PRSS3P35030 304 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 ELLP55199 621 aaPredicted RBP11.52□□□□□ -0.57
TPM3-219ENST00000509409 TAS2R46P59540 309 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 GDPD1Q8N9F7 314 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 OR6F1Q8NGZ6 308 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 MOB3AQ96BX8 217 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 DGCR14Q96DF8 476 aaKnown RBP11.52□□□□□ -0.57
TPM3-219ENST00000509409 OR51B2Q9Y5P1 312 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 DNAH1Q9P2D7 4330 aa11.52□□□□□ -0.57
TPM3-219ENST00000509409 GPR31O00270 319 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 FGF2P09038 288 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 HLA-DMAP28067 261 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 G6PCP35575 357 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 TSPAN5P62079 268 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 WT1-ASQ06250 92 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 LAMTOR1Q6IAA8 161 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 OR2C3Q8N628 320 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 UBAC2Q8NBM4 344 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 FCAMRQ8WWV6 532 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 ZNF436Q9C0F3 470 aaPredicted RBP11.51□□□□□ -0.57
TPM3-219ENST00000509409 VCX3AQ9NNX9 186 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 NDUFA4L2Q9NRX3 87 aa11.51□□□□□ -0.57
TPM3-219ENST00000509409 SMIM31A0A1B0GVY4 71 aa11.5□□□□□ -0.57
TPM3-219ENST00000509409 NAT1P18440 290 aa11.5□□□□□ -0.57
TPM3-219ENST00000509409 S100GP29377 79 aa11.5□□□□□ -0.57
TPM3-219ENST00000509409 Q56UQ5 140 aa11.5□□□□□ -0.57
TPM3-219ENST00000509409 LSM10Q969L4 123 aaKnown RBP11.5□□□□□ -0.57
TPM3-219ENST00000509409 BSCL2Q96G97 398 aaPredicted RBP11.5□□□□□ -0.57
TPM3-219ENST00000509409 TMEM56Q96MV1 263 aa11.5□□□□□ -0.57
TPM3-219ENST00000509409 C20orf24Q9BUV8 137 aa11.5□□□□□ -0.57
TPM3-219ENST00000509409 FKBP11Q9NYL4 201 aa11.5□□□□□ -0.57
TPM3-219ENST00000509409 C21orf62Q9NYP8 219 aa11.5□□□□□ -0.57
TPM3-219ENST00000509409 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
TPM3-219ENST00000509409 UBQLN2Q9UHD9 624 aa11.5□□□□□ -0.57
TPM3-219ENST00000509409 PRNDQ9UKY0 176 aa11.5□□□□□ -0.57
TPM3-219ENST00000509409 F11RQ9Y624 299 aaKnown RBP11.5□□□□□ -0.57
TPM3-219ENST00000509409 A0A087WXM4 84 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 HRH1P35367 487 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 PHLDA2Q53GA4 152 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 LPCAT3Q6P1A2 487 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 SPSB3Q6PJ21 355 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 LYSMD2Q8IV50 215 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 TMEM190Q8WZ59 177 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 YIPF6Q96EC8 236 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 OVOL2Q9BRP0 275 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 C5orf66Q9H5L9 145 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 COMMD3Q9UBI1 195 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 ANAPC10Q9UM13 185 aa11.49□□□□□ -0.57
TPM3-219ENST00000509409 IGHV3OR16-8A0A075B7F1 116 aa11.48□□□□□ -0.57
TPM3-219ENST00000509409 NDUFA4O00483 81 aa11.48□□□□□ -0.57
TPM3-219ENST00000509409 ZNF207O43670 478 aaKnown RBP11.48□□□□□ -0.57
TPM3-219ENST00000509409 SCARB1Q8WTV0 552 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms