RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TRBV9A0A0B4J1U6 114 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 SMIM31A0A1B0GVY4 71 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 MSGN1A6NI15 193 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 MARCH11A6NNE9 402 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 CCL24O00175 119 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 UPK2O00526 184 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 SLC22A5O76082 557 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 OR2A4O95047 310 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 RAB3DO95716 219 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 REG1AP05451 166 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 HLA-GP17693 338 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 TBPP20226 339 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 PTBP1P26599 531 aaKnown RBP eCLIP5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 HOXD3P31249 432 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 KIR2DS2P43631 304 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 LPAR6P43657 344 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 TAS2R31P59538 309 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 TAS2R19P59542 299 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 SUPT4H1P63272 117 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 SLC35B1P78383 322 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 MRPS10P82664 201 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 DEFA6Q01524 100 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 WT1-ASQ06250 92 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 KLK9Q2XQG4 91 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 AKIRIN2Q53H80 203 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 HAPLN4Q86UW8 402 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 SLC38A6Q8IZM9 456 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 OR4F17Q8NGA8 305 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 OR10W1Q8NGF6 305 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 OR51S1Q8NGJ8 323 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 OR6F1Q8NGZ6 308 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 DGCR14Q96DF8 476 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 SEC22AQ96IW7 307 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 UBE2E2Q96LR5 201 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 OR2A7Q96R45 310 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 OR4F4Q96R69 305 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 PLEKHA2Q9HB19 425 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 AKIP1Q9NQ31 210 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 ZFP57Q9NU63 452 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 AURKAIP1Q9NWT8 199 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 KLK9Q9UKQ9 250 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 PRELID3BQ9Y3B1 194 aa5.53□□□□□ -1.52
TOPBP1-207ENST00000509162 IGLV11-55A0A075B6I3 123 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 FABP12A6NFH5 140 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 MFSD2BA6NFX1 497 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 PRSS29PA6NIE9 313 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 H0Y980 276 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 BRI3O95415 125 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 HPRT1P00492 218 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 CTSDP07339 412 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 AKAIN1P0CW23 69 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 CTRB1P17538 263 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 MYCNOSP40205 109 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 RPL27AP46776 148 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 PIGPP57054 158 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 TPPP2P59282 170 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 SSBP1Q04837 148 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 EGFEM1PQ0D2K5 195 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 CATR1Q13166 79 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 SP6Q3SY56 376 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 SCGB2B2Q4G0G5 96 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 CTRB2Q6GPI1 263 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 IL34Q6ZMJ4 242 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 ADAMTSL5Q6ZMM2 481 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 Q6ZRM9 215 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 MMD2Q8IY49 270 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 TCTEX1D1Q8N7M0 179 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 OR11H1Q8NG94 326 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 OR5M8Q8NGP6 311 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 DLX4Q92988 240 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 HRASLSQ9HDD0 168 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 S4R3C0 116 aa5.52□□□□□ -1.53
TOPBP1-207ENST00000509162 WI2-2373I1.2A0A1W2PRP0 233 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 CRYM-AS1A6NIL9 109 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 C15orf61A6NNL5 157 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 NPIPB5A8MRT5 1133 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 K7EIL1 84 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 BMPR1BO00238 502 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 MPPED1O15442 326 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 NDUFB8O95169 186 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 CNIH1O95406 144 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 KRASP01116 189 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 IGHV3-23P01764 117 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 TRGV3P03979 118 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 CRYGCP07315 174 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 OR5AC1P0C628 307 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 PGAM2P15259 253 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 NQO2P16083 231 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 UCP1P25874 307 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 TSPAN5P62079 268 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 RPL8P62917 257 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 CNPY1Q3B7I2 92 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 SPINK9Q5DT21 86 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 TTC9CQ8N5M4 171 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 TERB2Q8NHR7 220 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 TMEM170AQ8WVE7 144 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 DCUN1D4Q92564 292 aa5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 THAP7Q9BT49 309 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 QTRT1Q9BXR0 403 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-207ENST00000509162 NDUFA4L2Q9NRX3 87 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms