RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 ZNF2Q9BSG1 426 aaPredicted RBP9.38□□□□□ -0.91
PDPN-208ENST00000509009 QTRT1Q9BXR0 403 aaKnown RBP9.38□□□□□ -0.91
PDPN-208ENST00000509009 SRD5A3Q9H8P0 318 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 COMMD9Q9P000 198 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 SERPINE2P07093 398 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 PRSS3P35030 304 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 WT1-ASQ06250 92 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 ZNF585BQ52M93 769 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 PLET1Q6UQ28 207 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 CADM3Q8N126 398 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 OR1L8Q8NGR8 309 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 OR5H2Q8NGV7 314 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 VN1R17PQ8TDU5 208 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 FCAMRQ8WWV6 532 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 DGCR14Q96DF8 476 aaKnown RBP9.37□□□□□ -0.91
PDPN-208ENST00000509009 LYSTQ99698 3801 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 FAM110AQ9BQ89 295 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 NDUFA4L2Q9NRX3 87 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 THYN1Q9P016 225 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 RYR2Q92736 4967 aa9.37□□□□□ -0.91
PDPN-208ENST00000509009 STARD9Q9P2P6 4700 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 A0A087WXM4 84 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 IGHV3-35A0A0C4DH35 117 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
PDPN-208ENST00000509009 KRASP01116 189 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 RLN1P04808 185 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 GPR183P32249 361 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 MFAP2P55001 183 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 ELLP55199 621 aaPredicted RBP9.36□□□□□ -0.91
PDPN-208ENST00000509009 TAS2R46P59540 309 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 ERVK-16P61578 105 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 SLC25A24Q6NUK1 477 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 SLC16A13Q7RTY0 426 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 HSD17B13Q7Z5P4 300 aaPredicted RBP9.36□□□□□ -0.91
PDPN-208ENST00000509009 GDPD1Q8N9F7 314 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 TSPAN14Q8NG11 270 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 OR52B4Q8NGK2 314 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 OR6F1Q8NGZ6 308 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 MARC2Q969Z3 335 aa9.36□□□□□ -0.91
PDPN-208ENST00000509009 ZNF436Q9C0F3 470 aaPredicted RBP9.36□□□□□ -0.91
PDPN-208ENST00000509009 MRPL27Q9P0M9 148 aaKnown RBP9.36□□□□□ -0.91
PDPN-208ENST00000509009 TRAV25A0A0B4J276 109 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 MARCH11A6NNE9 402 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 GPR31O00270 319 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 CYB5BO43169 146 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 TGOLN2O43493 480 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 HLA-DMAP28067 261 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 G6PCP35575 357 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 ANKRD55Q3KP44 614 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 THOC7Q6I9Y2 204 aaKnown RBP9.35□□□□□ -0.91
PDPN-208ENST00000509009 BTNL8Q6UX41 500 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 CMTM1Q8IZ96 169 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 IL17DQ8TAD2 202 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 GPX8Q8TED1 209 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 SLC25A46Q96AG3 418 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 HINT2Q9BX68 163 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 NSG2Q9Y328 171 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 UFC1Q9Y3C8 167 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 DNAH1Q9P2D7 4330 aa9.35□□□□□ -0.91
PDPN-208ENST00000509009 SNAPC5O75971 98 aa9.34□□□□□ -0.91
PDPN-208ENST00000509009 EIF4EP06730 217 aaKnown RBP9.34□□□□□ -0.91
PDPN-208ENST00000509009 HRH1P35367 487 aa9.34□□□□□ -0.91
PDPN-208ENST00000509009 RBPMS2Q6ZRY4 209 aaKnown RBP9.34□□□□□ -0.91
PDPN-208ENST00000509009 SCARB1Q8WTV0 552 aa9.34□□□□□ -0.91
PDPN-208ENST00000509009 FXYD6Q9H0Q3 95 aa9.34□□□□□ -0.91
PDPN-208ENST00000509009 VCX3AQ9NNX9 186 aa9.34□□□□□ -0.91
PDPN-208ENST00000509009 COMMD3Q9UBI1 195 aa9.34□□□□□ -0.91
PDPN-208ENST00000509009 OR51B2Q9Y5P1 312 aa9.34□□□□□ -0.91
PDPN-208ENST00000509009 F11RQ9Y624 299 aaKnown RBP9.34□□□□□ -0.91
PDPN-208ENST00000509009 IGHV3-21A0A0B4J1V1 117 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 SMIM31A0A1B0GVY4 71 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 OR2T8A6NH00 312 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 APOA1P02647 267 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 TSPAN5P62079 268 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 LPCAT3Q6P1A2 487 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 LSM10Q969L4 123 aaKnown RBP9.33□□□□□ -0.92
PDPN-208ENST00000509009 CMTM3Q96MX0 182 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 ATP6V0BQ99437 205 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 OVOL2Q9BRP0 275 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 CHRDL1Q9BU40 450 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 C5orf66Q9H5L9 145 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 FAM212BQ9NTI7 297 aaPredicted RBP9.33□□□□□ -0.92
PDPN-208ENST00000509009 FKBP11Q9NYL4 201 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 PRNDQ9UKY0 176 aa9.33□□□□□ -0.92
PDPN-208ENST00000509009 LOC102724200A0A096LPH7 203 aaPredicted RBP9.32□□□□□ -0.92
PDPN-208ENST00000509009 DBX1A6NMT0 343 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 F8W735 103 aaPredicted RBP9.32□□□□□ -0.92
PDPN-208ENST00000509009 K7EIM0 57 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 TNFAIP8O95379 198 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 ELK1P19419 428 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 ADMP35318 185 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 NCS1P62166 190 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 PHLDA2Q53GA4 152 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 SPSB3Q6PJ21 355 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 OR2C3Q8N628 320 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 OR1L6Q8NGR2 347 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 OR5B3Q8NH48 314 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 TMEM190Q8WZ59 177 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 BSCL2Q96G97 398 aaPredicted RBP9.32□□□□□ -0.92
PDPN-208ENST00000509009 TMEM56Q96MV1 263 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms