RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 GNB4Q9HAV0 340 aa8.2□□□□□ -1.1
POLR2J3-213ENST00000508848 TEX13DA0A0J9YY54 714 aaPredicted RBP8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 TEX50A0A1B0GTY4 177 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 C13orf42A0A1B0GVH6 325 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 A0A1B0GW64 132 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 IGLC7A0M8Q6 106 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 CGB1A6NKQ9 187 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 IGKV1-39P01597 117 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 IGKV1D-39P04432 117 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 TRAPPC2P0DI81 140 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 TRAPPC2BP0DI82 140 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 ZP3P21754 424 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 C18orf65Q6ZTR6 163 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 SSX9Q7RTT3 188 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 H2BFWTQ7Z2G1 175 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 DPF1Q92782 380 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 TMEM56Q96MV1 263 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 TP53RKQ96S44 253 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 THYN1Q9P016 225 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 TMEM56-RWDD3S4R434 201 aa8.19□□□□□ -1.1
POLR2J3-213ENST00000508848 TRAV3A0A0B4J244 114 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 LOC100996750A0A140TA64 210 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 C15orf61A6NNL5 157 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 LINC01619G3V211 115 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 G6PCP35575 357 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 UBE2MP61081 183 aaKnown RBP8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 HSPE1P61604 102 aaKnown RBP8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 SRPXP78539 464 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 PDLIM3Q53GG5 364 aaPredicted RBP8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 TMEM128Q5BJH2 165 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 HIST2H2BDQ6DRA6 164 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 SGPP2Q8IWX5 399 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 S100ZQ8WXG8 99 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 RBPMSQ93062 196 aaKnown RBP8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 LSM10Q969L4 123 aaKnown RBP8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 FANCD2OSQ96PS1 177 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 SDHCQ99643 169 aaPredicted RBP8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 KRTAP4-6Q9BYQ5 205 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 NAA60Q9H7X0 242 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 ZNF355PQ9NSJ1 428 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 COA4Q9NYJ1 87 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 SIGLEC8Q9NYZ4 499 aa8.18□□□□□ -1.1
POLR2J3-213ENST00000508848 IGLV11-55A0A075B6I3 123 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 TRBV7-1A0A0A6YYK4 115 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 DUXBA0A1W2PPF3 345 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 PI3P19957 117 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 PPP5CP53041 499 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 RHOGP84095 191 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 ATP5G2Q06055 141 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 KLF5Q13887 457 aaPredicted RBP8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 C10orf55Q5SWW7 151 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 C9orf66Q5T8R8 295 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 LRTM2Q8N967 370 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 ZNF114Q8NC26 417 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 OR52E5Q8NH55 327 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 OR4A16Q8NH70 328 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 VN1R17PQ8TDU5 208 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 RRNAD1Q96FB5 475 aaKnown RBP8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 CXorf58Q96LI9 332 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 MS4A10Q96PG2 267 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 AKIP1Q9NQ31 210 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 PEF1Q9UBV8 284 aaKnown RBP8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 OR51B2Q9Y5P1 312 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 TGP01266 2768 aa8.17□□□□□ -1.1
POLR2J3-213ENST00000508848 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 A0A0B4J293 547 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 HMX3A6NHT5 357 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 CENPXA8MT69 81 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 G3V4G9 280 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 IGKV1-5P01602 117 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 PRCDQ00LT1 54 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 RBMS2Q15434 407 aaKnown RBP8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 BAK1Q16611 211 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 TATDN3Q17R31 274 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 OXLD1Q5BKU9 147 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 PVRIGQ6DKI7 326 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 FAAP20Q6NZ36 180 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 OR1P1Q8NH06 330 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 CCDC32Q9BV29 185 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 MCUBQ9NWR8 336 aa8.16□□□□□ -1.1
POLR2J3-213ENST00000508848 A0A0B4J2A0 478 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 OVOL1O14753 267 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 OR5AC1P0C628 307 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 OR13C7P0DN81 318 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 SLC25A6P12236 298 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 ANXA3P12429 323 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 DEFA4P12838 97 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 IL7P13232 177 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 AREGP15514 252 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 IGLL1P15814 213 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 FCGR2BP31994 310 aaPredicted RBP8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 SUPT4H1P63272 117 aaKnown RBP8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 ERHP84090 104 aaKnown RBP8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 WT1-ASQ06250 92 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 TMEM187Q14656 261 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 DEFB136Q30KP8 78 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 C15orf32Q32M92 178 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 SP6Q3SY56 376 aa8.15□□□□□ -1.1
POLR2J3-213ENST00000508848 ACSM6Q6P461 480 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms