RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 BTCP35070 178 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 RPL27AP46776 148 aaKnown RBP12.29□□□□□ -0.44
LMNA-222ENST00000508500 ARPC4P59998 168 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 RNASE10Q5GAN6 216 aaKnown RBP12.29□□□□□ -0.44
LMNA-222ENST00000508500 CASC10Q5T4H9 136 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 SSX9Q7RTT3 188 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 ARRDC1Q8N5I2 433 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 NECAP1Q8NC96 275 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 PRRT1Q99946 306 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 MARVELD1Q9BSK0 173 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 TRAV3A0A0B4J244 114 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 NPIPB5A8MRT5 1133 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 H0Y980 276 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 NDUFB8O95169 186 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 HLA-AP01891 365 aaKnown RBP12.28□□□□□ -0.44
LMNA-222ENST00000508500 CD3DP04234 171 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 TCRBP04435 133 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 CRYGCP07315 174 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 AREGP15514 252 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 RBMS2Q15434 407 aaKnown RBP12.28□□□□□ -0.44
LMNA-222ENST00000508500 MSMO1Q15800 293 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 KLK9Q2XQG4 91 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 C15orf32Q32M92 178 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 OR4A47Q6IF82 309 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 TMEM17Q86X19 198 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 OR4C16Q8NGL9 310 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 MUC7Q8TAX7 377 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 FYTTD1Q96QD9 318 aaKnown RBP12.28□□□□□ -0.44
LMNA-222ENST00000508500 SLC25A21Q9BQT8 299 aaPredicted RBP12.28□□□□□ -0.44
LMNA-222ENST00000508500 SLC2A9Q9NRM0 540 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 KLK9Q9UKQ9 250 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 ZNF257Q9Y2Q1 563 aa12.28□□□□□ -0.44
LMNA-222ENST00000508500 IGHV3-23P01764 117 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 IFNA6P05013 189 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 MAS1LP35410 378 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 FXYD4P59646 89 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 TATDN3Q17R31 274 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 ZNF818PQ6ZRF7 136 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 SGPP2Q8IWX5 399 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 SPAG16Q8N0X2 631 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 OR5AP2Q8NGF4 316 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 VSTM2AQ8TAG5 236 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 GIMAP1Q8WWP7 306 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 CCDC140Q96MF4 163 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 SLC5A7Q9GZV3 580 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 ZMAT4Q9H898 229 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 BET1LQ9NYM9 111 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 S4R3C0 116 aa12.27□□□□□ -0.45
LMNA-222ENST00000508500 ZNF785A8K8V0 405 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 NDUFB6O95139 128 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 OR2C1O95371 312 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 DHFRP00374 187 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 HRASP01112 189 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 REG1AP05451 166 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 CTRB1P17538 263 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 PSMB6P28072 239 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 KIR2DS2P43631 304 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 RPL8P62917 257 aaKnown RBP12.26□□□□□ -0.45
LMNA-222ENST00000508500 CTRB2Q6GPI1 263 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 SLC25A42Q86VD7 318 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 ZBTB34Q8NCN2 500 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 OR5H2Q8NGV7 314 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 SCGB3A2Q96PL1 93 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 MCUBQ9NWR8 336 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 FBXL7Q9UJT9 491 aa12.26□□□□□ -0.45
LMNA-222ENST00000508500 INMT-MINDY4F8WBC2 141 aa12.25□□□□□ -0.45
LMNA-222ENST00000508500 RBFOX2O43251 390 aaKnown RBP eCLIP12.25□□□□□ -0.455e-8■■■□□ 15.8
LMNA-222ENST00000508500 PRAF2O60831 178 aa12.25□□□□□ -0.45
LMNA-222ENST00000508500 HLA-DMAP28067 261 aa12.25□□□□□ -0.45
LMNA-222ENST00000508500 GNRHRP30968 328 aa12.25□□□□□ -0.45
LMNA-222ENST00000508500 POU2AF1Q16633 256 aa12.25□□□□□ -0.45
LMNA-222ENST00000508500 HAGHQ16775 308 aa12.25□□□□□ -0.45
LMNA-222ENST00000508500 CD300EQ496F6 205 aaPredicted RBP12.25□□□□□ -0.45
LMNA-222ENST00000508500 LCN12Q6JVE5 192 aa12.25□□□□□ -0.45
LMNA-222ENST00000508500 CITED4Q96RK1 184 aa12.25□□□□□ -0.45
LMNA-222ENST00000508500 EDA2RQ9HAV5 297 aa12.25□□□□□ -0.45
LMNA-222ENST00000508500 PEMTQ9UBM1 199 aa12.25□□□□□ -0.45
LMNA-222ENST00000508500 IGLV11-55A0A075B6I3 123 aa12.24□□□□□ -0.45
LMNA-222ENST00000508500 C2orf70A6NJV1 201 aa12.24□□□□□ -0.45
LMNA-222ENST00000508500 UPK2O00526 184 aa12.24□□□□□ -0.45
LMNA-222ENST00000508500 HLA-GP17693 338 aa12.24□□□□□ -0.45
LMNA-222ENST00000508500 HRH1P35367 487 aa12.24□□□□□ -0.45
LMNA-222ENST00000508500 OR2B8PP59922 312 aa12.24□□□□□ -0.45
LMNA-222ENST00000508500 DEFB114Q30KQ6 69 aa12.24□□□□□ -0.45
LMNA-222ENST00000508500 DHRS11Q6UWP2 260 aa12.24□□□□□ -0.45
LMNA-222ENST00000508500 CLEC19AQ6UXS0 136 aa12.24□□□□□ -0.45
LMNA-222ENST00000508500 LINC00322Q6ZN03 302 aaPredicted RBP12.24□□□□□ -0.45
LMNA-222ENST00000508500 CHAC2Q8WUX2 184 aa12.24□□□□□ -0.45
LMNA-222ENST00000508500 SELENOKQ9Y6D0 94 aa12.24□□□□□ -0.45
LMNA-222ENST00000508500 IGLC7A0M8Q6 106 aa12.23□□□□□ -0.45
LMNA-222ENST00000508500 GGCTO75223 188 aaKnown RBP12.23□□□□□ -0.45
LMNA-222ENST00000508500 S1PR2O95136 353 aa12.23□□□□□ -0.45
LMNA-222ENST00000508500 HPRT1P00492 218 aa12.23□□□□□ -0.45
LMNA-222ENST00000508500 CD7P09564 240 aa12.23□□□□□ -0.45
LMNA-222ENST00000508500 H2AFB2P0C5Z0 115 aa12.23□□□□□ -0.45
LMNA-222ENST00000508500 TAS2R31P59538 309 aa12.23□□□□□ -0.45
LMNA-222ENST00000508500 SURF2Q15527 256 aaPredicted RBP12.23□□□□□ -0.45
LMNA-222ENST00000508500 OR51S1Q8NGJ8 323 aa12.23□□□□□ -0.45
LMNA-222ENST00000508500 OR2K2Q8NGT1 345 aa12.23□□□□□ -0.45
LMNA-222ENST00000508500 OR51H1Q8NH63 302 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms