RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 SMIM26A0A096LP01 95 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 IGKV6-21A0A0C4DH24 114 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 IGHV4-61A0A0C4DH41 118 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 A0A0J9YXV3 536 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 KLLNB2CW77 178 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 PATE3B3GLJ2 98 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 GABARAPH6UMI1 98 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 APOC4-APOC2K7ER74 178 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 SOCS2O14508 198 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 TRBV12-3P01733 135 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 IGHV4-59P01825 116 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 APOC2P02655 101 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 PMP2P02689 132 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 CTSDP07339 412 aaPredicted RBP5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 VDAC2P45880 294 aaPredicted RBP5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 PPP1CAP62136 330 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 GRB2P62993 217 aaKnown RBP5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 RPS21P63220 83 aaKnown RBP5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 TIFABQ6ZNK6 161 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 SPNS2Q8IVW8 549 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 OR9G1Q8NH87 305 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 Q8TCH9 128 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 SDF2Q99470 211 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 SLC25A21Q9BQT8 299 aaPredicted RBP5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 IGHV3-20A0A0C4DH32 117 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 ZNF19P17023 458 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 PPIBP23284 216 aaKnown RBP5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 TMBIM6P55061 237 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 C6orf99Q4VX62 202 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 C11orf71Q6IPW1 123 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 Q6ZPA2 131 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 LRRTM1Q86UE6 522 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 BORCS8Q96FH0 119 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 CBLN4Q9NTU7 201 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 TTC3P53804 2025 aa5.83□□□□□ -1.48
PDGFRA-206ENST00000508170 IGHV3OR16-13A0A075B7E8 117 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 C7orf71A4D174 169 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 BBIP1A8MTZ0 92 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 RPS13P62277 151 aaKnown RBP5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 Q6Q795 121 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 DNM1P46Q6ZS02 220 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 SLC22A24Q8N4F4 322 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 BPIFB6Q8NFQ5 453 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 OR52P1PQ8NH57 321 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 NTN5Q8WTR8 489 aaPredicted RBP5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 TCEAL2Q9H3H9 227 aaPredicted RBP5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 NUFIP1Q9UHK0 495 aaKnown RBP5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 A0A0G2JMZ2 1700 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 WDR90Q96KV7 1748 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 IGHV3OR16-12A0A075B7B8 117 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 EPOPA6NHQ4 379 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 AGPAT2O15120 278 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 ANGPTL7O43827 346 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 CD2P06729 351 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 OR12D1P0DN82 309 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 GATA2P23769 480 aaPredicted RBP5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 ETV6P41212 452 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 DCDP81605 110 aaKnown RBP5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 MORN5Q5VZ52 161 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 C9orf40Q8IXQ3 194 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 RAB2BQ8WUD1 216 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 FRZBQ92765 325 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 C11orf52Q96A22 123 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 GINS4Q9BRT9 223 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 PLA2G2EQ9NZK7 142 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 LINC00527Q9UJ94 153 aa5.82□□□□□ -1.48
PDGFRA-206ENST00000508170 LRRC37A2A6NM11 1700 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 PTPRFP10586 1907 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 LOC389332A0A1B0GUA5 103 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 A0A1B0GVT2 93 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 PSPHP1O15172 72 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 CECR9P0C854 216 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 CXCL8P10145 99 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 VDAC1P21796 283 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 THBS3P49746 956 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 AKR1C2P52895 323 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 HERVK_113P63121 156 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 SRPXP78539 464 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 MUC21Q5SSG8 566 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 PRNTQ86SH4 94 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 TRPT1Q86TN4 253 aaKnown RBP5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 ZNF440Q8IYI8 595 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 RNF175Q8N4F7 328 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 NEURL3Q96EH8 262 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 ERMAPQ96PL5 475 aaPredicted RBP5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 GPX7Q96SL4 187 aaPredicted RBP5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 REG4Q9BYZ8 158 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 OTORQ9NRC9 128 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 HES2Q9Y543 173 aa5.81□□□□□ -1.48
PDGFRA-206ENST00000508170 IGLV5-45A0A087WSX0 123 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 TRAV8-1A0A0A6YYK1 113 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 TMEM272A0A1B0GTI8 110 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 TCRBV3S1A0A5B6 114 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 C4orf51C9J302 202 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 ZNF432O94892 652 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 P0DMU3 169 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 FAM231AP0DMU4 169 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 FAM231CP0DMU5 169 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 IMPA1P29218 277 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms