RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 FAM231DQ6ZW35 169 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 ATP5L2Q7Z4Y8 100 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 WFDC3Q8IUB2 231 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 SPACA3Q8IXA5 215 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR8I2Q8N0Y5 310 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 ARL6IP6Q8N6S5 226 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF439Q8NDP4 499 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF738Q8NE65 137 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR4P4Q8NGL7 312 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR13A1Q8NGR1 328 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 KLF14Q8TD94 323 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 SSMEM1Q8WWF3 244 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 SMIM12Q96EX1 92 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 C5orf30Q96GV9 206 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 COQ2Q96H96 371 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 FER1L6-AS2Q96M78 137 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 TRIB1Q96RU8 372 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 SAP30LQ9HAJ7 183 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 DNAJC4Q9NNZ3 241 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 TMEM140Q9NV12 185 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 PLA2G3Q9NZ20 509 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 FBXL7Q9UJT9 491 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 TP53TG3Q9ULZ0 132 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZNF257Q9Y2Q1 563 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 LAMTOR2Q9Y2Q5 125 aa4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 SOX21Q9Y651 276 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P16-201ENST00000508037 RTTNQ86VV8 2226 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 TRAV9-2A0A087WT02 112 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 TRGV5A0A0B4J1U4 118 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 IGHV1-69-2A0A0G2JMI3 117 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 A0A1B0GUS0 222 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 A0A1W2PS18 150 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 PGPEP1LA6NFU8 196 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 K7EN84 100 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 F2RL2O00254 374 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 SLC17A3O00476 420 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 AQP7O14520 342 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 RRHO14718 337 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR7C2O60412 319 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 HYPMO75409 117 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 HSBP1O75506 76 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 CA2P00918 260 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 SP1P08047 785 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 NPSP0C0P6 89 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 C8orf88P0DMB2 117 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 PMCHP20382 165 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 HNF1AP20823 631 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 USF1P22415 310 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 ACP1P24666 158 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 CRYBB3P26998 211 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 PRDX2P32119 198 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 CFHR2P36980 270 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 CDKN1AP38936 164 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 MEOX1P50221 254 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 PPOXP50336 477 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 PTTG1IPP53801 180 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 LINC00310P59036 64 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 RPS16P62249 146 aaKnown RBP4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 ARG2P78540 354 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 MRPS11P82912 194 aaKnown RBP4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 PSG7Q13046 419 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 KLF5Q13887 457 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 POU2AF1Q16633 256 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 MORN2Q502X0 79 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 IBA57Q5T440 356 aaKnown RBP4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 MBNL2Q5VZF2 373 aaKnown RBP4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 WDR82Q6UXN9 313 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 KRTAP1-3Q8IUG1 177 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 UBALD2Q8IYN6 164 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 TMEM178AQ8NBL3 297 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 ST6GALNAC3Q8NDV1 305 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 CACNG8Q8WXS5 425 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 NEUROG1Q92886 237 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 GRAMD2BQ96HH9 432 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 CDX2Q99626 313 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 NABP2Q9BQ15 211 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 FAM103A1Q9BTL3 118 aaKnown RBP4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 GCM1Q9NP62 436 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 ASCL3Q9NQ33 180 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 SERTAD4Q9NUC0 356 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 TMEM14BQ9NUH8 114 aa4.09□□□□□ -1.75
HMGB3P16-201ENST00000508037 CHD3Q12873 2000 aaKnown RBP4.09□□□□□ -1.76
HMGB3P16-201ENST00000508037 MED12Q93074 2177 aa4.09□□□□□ -1.76
HMGB3P16-201ENST00000508037 IGHV3-43A0A0B4J1X8 118 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 A6NNC1 897 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 DEFB108AA8MXU0 73 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 HSBP1L1C9JCN9 74 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 K7EP13 123 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 TCF21O43680 179 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 TOMM40O96008 361 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 CGAP01215 116 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 RNASE1P07998 156 aaKnown RBP4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 C3orf79P0CE67 100 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 ZNF883P0CG24 379 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 IGHV3-43DP0DP04 118 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 HIST1H1EP10412 219 aaKnown RBP4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 MGST1P10620 155 aaKnown RBP4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 DEFA4P12838 97 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 TSPOP30536 169 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 SRIP30626 198 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms