RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 RPL8P62917 257 aaKnown RBP14.3□□□□□ -0.12
SFXN1-208ENST00000507823 IGHV2-26A0A0B4J1V2 119 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 MT-ND4LP03901 98 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 RNASE2P10153 161 aaKnown RBP14.29□□□□□ -0.12
SFXN1-208ENST00000507823 MEF2BQ02080 365 aaPredicted RBP14.29□□□□□ -0.12
SFXN1-208ENST00000507823 HLA-DRB5Q30154 266 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 WDR25Q64LD2 544 aaPredicted RBP14.29□□□□□ -0.12
SFXN1-208ENST00000507823 MALRD1Q5VYJ5 2156 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 ABCA4P78363 2273 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 SMCO3A2RU48 225 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 TMEM250H0YL14 139 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 AGAP20933 346 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 RPL29P47914 159 aaKnown RBP14.29□□□□□ -0.12
SFXN1-208ENST00000507823 PNRC1Q12796 327 aaPredicted RBP14.29□□□□□ -0.12
SFXN1-208ENST00000507823 AVPI1Q5T686 147 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 TEPPQ6URK8 271 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 PXMP4Q9Y6I8 212 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 NCOR2Q9Y618 2525 aa14.29□□□□□ -0.12
SFXN1-208ENST00000507823 B4DEV8 164 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 CRYBA1P05813 215 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 LGALS7P47929 136 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 PSMB3P49720 205 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 AKIRIN2Q53H80 203 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 OR8B3Q8NGG8 313 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 OR8B2Q96RD0 313 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 PRRX1P54821 245 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 MRGPRG-AS1Q2M3A8 158 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 TMPRSS5Q9H3S3 457 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 SOD3P08294 240 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 PRR20EP86478 221 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 PRR20CP86479 221 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 PRR20DP86480 221 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 PRR20BP86481 221 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 PRR20AP86496 221 aa14.28□□□□□ -0.12
SFXN1-208ENST00000507823 NBASA2RRP1 2371 aa14.27□□□□□ -0.12
SFXN1-208ENST00000507823 PPIAL4CA0A0B4J2A2 164 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 CGB1A6NKQ9 187 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 EIF3GO75821 320 aaKnown RBP eCLIP14.27□□□□□ -0.13
SFXN1-208ENST00000507823 PPIAL4GP0DN37 164 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 C4orf17Q53FE4 359 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 GCSAMLQ5JQS6 135 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 TMEM144Q7Z5S9 345 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 HINT2Q9BX68 163 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 CLEC7AQ9BXN2 247 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 COMMD5Q9GZQ3 224 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 A0A1W2PN81 502 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 CHRNA7P36544 502 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 MIC13Q5XKP0 118 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 SDF2L1Q9HCN8 221 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 SIRT7Q9NRC8 400 aa14.27□□□□□ -0.13
SFXN1-208ENST00000507823 CHD8Q9HCK8 2581 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 A0A1W2PPE2 198 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 MALSU1Q96EH3 234 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 HIVEP3Q5T1R4 2406 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 CXorf65A6NEN9 183 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 BUB1B-PAK6H3BSN5 160 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 HMGB3O15347 200 aaKnown RBP14.26□□□□□ -0.13
SFXN1-208ENST00000507823 CRYGBP07316 175 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 STAG3L2P0CL84 134 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 STAG3L3P0CL85 134 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 CTRB1P17538 263 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 CEBPGP53567 150 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 RAB31Q13636 194 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 VMA21Q3ZAQ7 101 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 CTRB2Q6GPI1 263 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 TEX45Q8NA69 505 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 CACNG8Q8WXS5 425 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 TIMD4Q96H15 378 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 MLXQ9UH92 298 aa14.26□□□□□ -0.13
SFXN1-208ENST00000507823 CACNA1AO00555 2505 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 LY6LH3BQJ8 138 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 ITLN2Q8WWU7 325 aaPredicted RBP14.25□□□□□ -0.13
SFXN1-208ENST00000507823 ZNF430Q9H8G1 570 aaPredicted RBP14.25□□□□□ -0.13
SFXN1-208ENST00000507823 TMEM242Q9NWH2 141 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 SLC45A2Q9UMX9 530 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 LIPFP07098 398 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 GPX4P36969 197 aaPredicted RBP14.25□□□□□ -0.13
SFXN1-208ENST00000507823 B2MP61769 119 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 CD69Q07108 199 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 PVRIGQ6DKI7 326 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 STPG3Q8N7X2 389 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 OR10W1Q8NGF6 305 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 OR4P4Q8NGL7 312 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 ISOC2Q96AB3 205 aa14.25□□□□□ -0.13
SFXN1-208ENST00000507823 COL6A6A6NMZ7 2263 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 TMEM8BA6NDV4 472 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 E7EUB6 86 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 OPN1MWP04001 364 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 LINC00869P0C866 280 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 OPN1MW2P0DN77 364 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 OPN1MW3P0DN78 364 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 DEFA4P12838 97 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 ERHP84090 104 aaKnown RBP14.24□□□□□ -0.13
SFXN1-208ENST00000507823 CYP2G1PQ6ZSU1 146 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 CHODLQ9H9P2 273 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 PATZ1Q9HBE1 687 aaKnown RBP14.24□□□□□ -0.13
SFXN1-208ENST00000507823 PIEZO1Q92508 2521 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 hCG_1809904A0A1W2PP81 198 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 A0A1W2PPV4 95 aa14.24□□□□□ -0.13
SFXN1-208ENST00000507823 A0A1W2PR64 198 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms