RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 NDUFA4L2Q9NRX3 87 aa13.87□□□□□ -0.19
RNF4-209ENST00000507784 VPREB3Q9UKI3 123 aa13.87□□□□□ -0.19
RNF4-209ENST00000507784 ACANP16112 2415 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 A0A1W2PN81 502 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 FAM24AA6NFZ4 105 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 E7EUB6 86 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 H3BP45 60 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 APELAP0DMC3 54 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 LYL1P12980 280 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 CHRNA7P36544 502 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 CAV2P51636 162 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 CX3CL1P78423 397 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 SPANXN5Q5MJ07 72 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 INO80EQ8NBZ0 244 aaPredicted RBP13.86□□□□□ -0.19
RNF4-209ENST00000507784 OR10W1Q8NGF6 305 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 SRSF12Q8WXF0 261 aaKnown RBP13.86□□□□□ -0.19
RNF4-209ENST00000507784 SMIM8Q96KF7 97 aa13.86□□□□□ -0.19
RNF4-209ENST00000507784 CIB3Q96Q77 187 aaPredicted RBP13.86□□□□□ -0.19
RNF4-209ENST00000507784 MSGN1A6NI15 193 aa13.85□□□□□ -0.19
RNF4-209ENST00000507784 CGB1A6NKQ9 187 aa13.85□□□□□ -0.19
RNF4-209ENST00000507784 M0QZK8 103 aa13.85□□□□□ -0.19
RNF4-209ENST00000507784 IFNA10P01566 189 aa13.85□□□□□ -0.19
RNF4-209ENST00000507784 HLA-DRB1P01911 266 aa13.85□□□□□ -0.19
RNF4-209ENST00000507784 VDAC2P45880 294 aaPredicted RBP13.85□□□□□ -0.19
RNF4-209ENST00000507784 P2RY1P47900 373 aa13.85□□□□□ -0.19
RNF4-209ENST00000507784 AP2S1P53680 142 aaPredicted RBP13.85□□□□□ -0.19
RNF4-209ENST00000507784 PAX9P55771 341 aa13.85□□□□□ -0.19
RNF4-209ENST00000507784 ERHP84090 104 aaKnown RBP13.85□□□□□ -0.19
RNF4-209ENST00000507784 PDLIM3Q53GG5 364 aaPredicted RBP13.85□□□□□ -0.19
RNF4-209ENST00000507784 ZNF562Q6V9R5 426 aa13.85□□□□□ -0.19
RNF4-209ENST00000507784 ARPC1AQ92747 370 aa13.85□□□□□ -0.19
RNF4-209ENST00000507784 FAM103A1Q9BTL3 118 aaKnown RBP13.85□□□□□ -0.19
RNF4-209ENST00000507784 C11orf1Q9H5F2 150 aa13.85□□□□□ -0.19
RNF4-209ENST00000507784 IGHV7-81A0A0B4J1V7 117 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 HMSDA8MTL9 139 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 TMEM50AO95807 157 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 RPL12P30050 165 aaKnown RBP13.84□□□□□ -0.19
RNF4-209ENST00000507784 RPP30P78346 268 aaKnown RBP13.84□□□□□ -0.19
RNF4-209ENST00000507784 TMEM65Q6PI78 240 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 MRPL41Q8IXM3 137 aaKnown RBP13.84□□□□□ -0.19
RNF4-209ENST00000507784 OR2C3Q8N628 320 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 ZNF418Q8TF45 676 aaPredicted RBP13.84□□□□□ -0.19
RNF4-209ENST00000507784 HSPB9Q9BQS6 159 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 MFFQ9GZY8 342 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 PARP11Q9NR21 331 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 TNFSF18Q9UNG2 199 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 STRAPQ9Y3F4 350 aaKnown RBP13.84□□□□□ -0.19
RNF4-209ENST00000507784 OTOGQ6ZRI0 2925 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 TNCP24821 2201 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 PLXNB1O43157 2135 aa13.84□□□□□ -0.19
RNF4-209ENST00000507784 A0A1B0GW64 132 aa13.83□□□□□ -0.2
RNF4-209ENST00000507784 LY86O95711 162 aa13.83□□□□□ -0.2
RNF4-209ENST00000507784 AMY1AP04745 511 aa13.83□□□□□ -0.2
RNF4-209ENST00000507784 REG1AP05451 166 aa13.83□□□□□ -0.2
RNF4-209ENST00000507784 OR13C7P0DN81 318 aa13.83□□□□□ -0.2
RNF4-209ENST00000507784 SNCAP37840 140 aa13.83□□□□□ -0.2
RNF4-209ENST00000507784 TAS2R30P59541 319 aa13.83□□□□□ -0.2
RNF4-209ENST00000507784 SSBP2P81877 361 aaPredicted RBP13.83□□□□□ -0.2
RNF4-209ENST00000507784 TMEM267Q0VDI3 215 aaPredicted RBP13.83□□□□□ -0.2
RNF4-209ENST00000507784 TMEM86BQ8N661 226 aa13.83□□□□□ -0.2
RNF4-209ENST00000507784 SLC25A31Q9H0C2 315 aa13.83□□□□□ -0.2
RNF4-209ENST00000507784 WSB1Q9Y6I7 421 aa13.83□□□□□ -0.2
RNF4-209ENST00000507784 ZNF469Q96JG9 3925 aaPredicted RBP13.83□□□□□ -0.2
RNF4-209ENST00000507784 DNAJC9-AS1A6NH13 148 aa13.82□□□□□ -0.2
RNF4-209ENST00000507784 TSC22D2O75157 780 aa13.82□□□□□ -0.2
RNF4-209ENST00000507784 HKR1P10072 659 aa13.82□□□□□ -0.2
RNF4-209ENST00000507784 BLCAPP62952 87 aa13.82□□□□□ -0.2
RNF4-209ENST00000507784 ACOT7LQ6ZUV0 252 aa13.82□□□□□ -0.2
RNF4-209ENST00000507784 OR4C12Q96R67 309 aa13.82□□□□□ -0.2
RNF4-209ENST00000507784 LYRM2Q9NU23 88 aaPredicted RBP13.82□□□□□ -0.2
RNF4-209ENST00000507784 CELSR1Q9NYQ6 3014 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 IGSF23A1L1A6 192 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 LINC01548A6NM66 108 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 TEX22C9J3V5 150 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 OR8U8P0C7N1 319 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 METTL15P1P0C7V9 234 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 AREGP15514 252 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 CXCL2P19875 107 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 NDPQ00604 133 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 WT1-ASQ06250 92 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 TUSC1Q2TAM9 212 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 LGALSLQ3ZCW2 172 aaPredicted RBP13.81□□□□□ -0.2
RNF4-209ENST00000507784 ARSJQ5FYB0 599 aaPredicted RBP13.81□□□□□ -0.2
RNF4-209ENST00000507784 TMEM252Q8N6L7 170 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 SLC24A4Q8NFF2 622 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 U3KQ87 197 aa13.81□□□□□ -0.2
RNF4-209ENST00000507784 IGLC7A0M8Q6 106 aa13.8□□□□□ -0.2
RNF4-209ENST00000507784 ATP6V0E1O15342 81 aa13.8□□□□□ -0.2
RNF4-209ENST00000507784 CST7O76096 145 aa13.8□□□□□ -0.2
RNF4-209ENST00000507784 NPY1RP25929 384 aa13.8□□□□□ -0.2
RNF4-209ENST00000507784 HTR2BP41595 481 aa13.8□□□□□ -0.2
RNF4-209ENST00000507784 SUB1P53999 127 aaKnown RBP eCLIP13.8□□□□□ -0.2
RNF4-209ENST00000507784 RAB11AP62491 216 aa13.8□□□□□ -0.2
RNF4-209ENST00000507784 EWSR1Q01844 656 aaKnown RBP eCLIP13.8□□□□□ -0.2
RNF4-209ENST00000507784 ECSCRQ19T08 205 aa13.8□□□□□ -0.2
RNF4-209ENST00000507784 UNQ5815/PRO19632Q6UWF5 114 aa13.8□□□□□ -0.2
RNF4-209ENST00000507784 SLC35E3Q7Z769 313 aa13.8□□□□□ -0.2
RNF4-209ENST00000507784 STX12Q86Y82 276 aa13.8□□□□□ -0.2
RNF4-209ENST00000507784 LFNGQ8NES3 379 aa13.8□□□□□ -0.2
RNF4-209ENST00000507784 FBXO7Q9Y3I1 522 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms