RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 RPL18Q07020 188 aaKnown RBP1.06□□□□□ -2.24
LSM6-205ENST00000507449 HIST3H3Q16695 136 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 Q1T7F1 81 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 ARHGAP11BQ3KRB8 267 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 SYPL2Q5VXT5 272 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 GLT8D1Q68CQ7 371 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 FAM173BQ6P4H8 233 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 OR8J2Q8NGG1 315 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 TP73-AS1Q9UF72 201 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 LSM5Q9Y4Y9 91 aaKnown RBP1.06□□□□□ -2.24
LSM6-205ENST00000507449 CR1P17927 2039 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 KIAA2026Q5HYC2 2103 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 MALRD1Q5VYJ5 2156 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 SNAPC4Q5SXM2 1469 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 CPAMD8Q8IZJ3 1885 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 TRBV20OR9-2A0A075B6H5 130 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 TRBV6-5A0A0K0K1A5 114 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 MEIS3P1A6NDR6 274 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 ORC5O43913 435 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 IGKV1-5P01602 117 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 C1QAP02745 245 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 PRM2P04554 102 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 TRGC1P0CF51 173 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 MAGEA12P43365 314 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 HAAOP46952 286 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 CCL20P78556 96 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 NUMA1Q14980 2115 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 C9orf64Q5T6V5 341 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 HIST2H3PS2Q5TEC6 136 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 FP248Q71RG6 208 aaPredicted RBP1.05□□□□□ -2.24
LSM6-205ENST00000507449 C10orf126Q8N4M7 172 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 PPP1R2P1Q96PQ5 205 aa1.05□□□□□ -2.24
LSM6-205ENST00000507449 NAA38Q9BRA0 125 aaKnown RBP1.05□□□□□ -2.24
LSM6-205ENST00000507449 WDR61Q9GZS3 305 aaKnown RBP1.05□□□□□ -2.24
LSM6-205ENST00000507449 TRBV10-2A0A0K0K1G8 114 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 A0A1B0GV50 99 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 NOS1APO75052 506 aaPredicted RBP1.04□□□□□ -2.24
LSM6-205ENST00000507449 TNNC2P02585 160 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 CLPSP04118 112 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 IFNA16P05015 189 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 AKR1C3P42330 323 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 MYL6P60660 151 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 SPCS3P61009 180 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 GRK1Q15835 563 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 TMEM86AQ8N2M4 240 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 DEFB119Q8N690 84 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 ZNF439Q8NDP4 499 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 FAM96AQ9H5X1 160 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 PKIGQ9Y2B9 76 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 LHFPL6Q9Y693 200 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 V9GYY5 206 aaPredicted RBP1.04□□□□□ -2.24
LSM6-205ENST00000507449 SMARCA4P51532 1647 aa1.04□□□□□ -2.24
LSM6-205ENST00000507449 PTPRSQ13332 1948 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 IGKV2-29A2NJV5 120 aaPredicted RBP1.03□□□□□ -2.24
LSM6-205ENST00000507449 FABP5P3A8MUU1 101 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 M0R036 132 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 FAAHO00519 579 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 SLC22A1O15245 554 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 CHP2O43745 196 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 LYPLA2O95372 231 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 HIST1H1TP22492 207 aaPredicted RBP1.03□□□□□ -2.24
LSM6-205ENST00000507449 ITGB3BPQ13352 177 aaPredicted RBP1.03□□□□□ -2.24
LSM6-205ENST00000507449 NNATQ16517 81 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 ACOT6Q3I5F7 207 aaPredicted RBP1.03□□□□□ -2.24
LSM6-205ENST00000507449 CCDC122Q5T0U0 273 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 IBA57Q5T440 356 aaKnown RBP1.03□□□□□ -2.24
LSM6-205ENST00000507449 AADACL3Q5VUY0 350 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 Q6ZS49 121 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 C15orf53Q8NAA6 179 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 IMP4Q96G21 291 aaKnown RBP1.03□□□□□ -2.24
LSM6-205ENST00000507449 DERL1Q9BUN8 251 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 CST9LQ9H4G1 147 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 BAIAP2Q9UQB8 552 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 TONSLQ96HA7 1378 aa1.03□□□□□ -2.24
LSM6-205ENST00000507449 WRNQ14191 1432 aaPredicted RBP eCLIP1.03□□□□□ -2.24
LSM6-205ENST00000507449 CCDC88CQ9P219 2028 aa1.03□□□□□ -2.25
LSM6-205ENST00000507449 TRAPPC13A5PLN9 417 aa1.02□□□□□ -2.25
LSM6-205ENST00000507449 HLA-DRB1P01911 266 aa1.02□□□□□ -2.25
LSM6-205ENST00000507449 CRPP02741 224 aa1.02□□□□□ -2.25
LSM6-205ENST00000507449 RPS4Y1P22090 263 aaKnown RBP1.02□□□□□ -2.25
LSM6-205ENST00000507449 SULT1A1P50225 295 aa1.02□□□□□ -2.25
LSM6-205ENST00000507449 ZNF80P51504 273 aaPredicted RBP1.02□□□□□ -2.25
LSM6-205ENST00000507449 FXYD2P54710 66 aa1.02□□□□□ -2.25
LSM6-205ENST00000507449 KRTAP10-4P60372 401 aaPredicted RBP1.02□□□□□ -2.25
LSM6-205ENST00000507449 RPS20P60866 119 aaKnown RBP1.02□□□□□ -2.25
LSM6-205ENST00000507449 KCNJ8Q15842 424 aa1.02□□□□□ -2.25
LSM6-205ENST00000507449 MTUS2Q5JR59 1369 aa1.02□□□□□ -2.25
LSM6-205ENST00000507449 DHFR2Q86XF0 187 aa1.02□□□□□ -2.25
LSM6-205ENST00000507449 OR8B3Q8NGG8 313 aa1.02□□□□□ -2.25
LSM6-205ENST00000507449 MRPL30Q8TCC3 161 aaKnown RBP1.02□□□□□ -2.25
LSM6-205ENST00000507449 MBD3L1Q8WWY6 194 aa1.02□□□□□ -2.25
LSM6-205ENST00000507449 HELZ2Q9BYK8 2649 aaKnown RBP1.02□□□□□ -2.25
LSM6-205ENST00000507449 MRPL27Q9P0M9 148 aaKnown RBP1.02□□□□□ -2.25
LSM6-205ENST00000507449 PTPRBP23467 1997 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 MEIKINA0A087WXM9 373 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 IRGMA1A4Y4 181 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 SERPINA6P08185 405 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 LYNX1P0DP58 116 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 RPL5P46777 297 aaKnown RBP1.01□□□□□ -2.25
LSM6-205ENST00000507449 DEFA1P59665 94 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms