RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MRPL27Q9P0M9 148 aaKnown RBP8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 UFC1Q9Y3C8 167 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 OR2T8A6NH00 312 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 TGOLN2O43493 480 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 RLN1P04808 185 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 FGF2P09038 288 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 TRAPPC2P0DI81 140 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 TRAPPC2BP0DI82 140 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 OR13C7P0DN81 318 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 GNRHRP30968 328 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 ELLP55199 621 aaPredicted RBP8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 WT1-ASQ06250 92 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 KCTD21Q4G0X4 260 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 THOC7Q6I9Y2 204 aaKnown RBP8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 GDPD1Q8N9F7 314 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 VN1R17PQ8TDU5 208 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 TMEM190Q8WZ59 177 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 BORCS5Q969J3 196 aa8.61□□□□□ -1.03
HMGCS1-204ENST00000507293 HYDINQ4G0P3 5121 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 TEX50A0A1B0GTY4 177 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 MARCH11A6NNE9 402 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 CYB5BO43169 146 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 PGLYRP1O75594 196 aaPredicted RBP8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 TNFAIP8O95379 198 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 SERPINE2P07093 398 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 TGFBR1P36897 503 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 SLC25A24Q6NUK1 477 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 HSD17B13Q7Z5P4 300 aaPredicted RBP8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 OR2C3Q8N628 320 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 OR1L8Q8NGR8 309 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 MOB3AQ96BX8 217 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 LYSTQ99698 3801 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 SPAG8Q99932 426 aaPredicted RBP8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 ZNF2Q9BSG1 426 aaPredicted RBP8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 HINT2Q9BX68 163 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 C5orf66Q9H5L9 145 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 UBQLN2Q9UHD9 624 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 ANAPC10Q9UM13 185 aa8.6□□□□□ -1.03
HMGCS1-204ENST00000507293 IGHV3-21A0A0B4J1V1 117 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 XRCC3O43542 346 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 TMEM127O75204 238 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 PMP2P02689 132 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 F2RP25116 425 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 G6PCP35575 357 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 LPAR6P43657 344 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 RFX2P48378 723 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 MFAP2P55001 183 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 TAS2R20P59543 309 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 UBE2NLQ5JXB2 153 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 TMEM69Q5SWH9 247 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 SLC38A6Q8IZM9 456 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 OR5H2Q8NGV7 314 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 FCAMRQ8WWV6 532 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 LSM10Q969L4 123 aaKnown RBP8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 S100A16Q96FQ6 103 aaKnown RBP8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 BSCL2Q96G97 398 aaPredicted RBP8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 FXYD6Q9H0Q3 95 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 DAZ1Q9NQZ3 744 aaKnown RBP8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 C21orf62Q9NYP8 219 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 NSG2Q9Y328 171 aa8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 F11RQ9Y624 299 aaKnown RBP8.59□□□□□ -1.03
HMGCS1-204ENST00000507293 IGHV3OR16-8A0A075B7F1 116 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 NDUFA4O00483 81 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 TSPAN4O14817 238 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 KRASP01116 189 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 APOC4P55056 127 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 TAS2R46P59540 309 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 PMS2P11Q13670 270 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 DHRS11Q6UWP2 260 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 CROCCP3Q8IVE0 287 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 SAMD12Q8N8I0 201 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 UBAC2Q8NBM4 344 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 SCARB1Q8WTV0 552 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 DGCR14Q96DF8 476 aaKnown RBP8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 CHRDL1Q9BU40 450 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 C20orf24Q9BUV8 137 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 VCX3AQ9NNX9 186 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 NDUFA4L2Q9NRX3 87 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 OR51B2Q9Y5P1 312 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 ALMS1Q8TCU4 4167 aa8.58□□□□□ -1.04
HMGCS1-204ENST00000507293 PLECQ15149 4684 aaKnown RBP8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 A0A087WXM4 84 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 A0A0J9YWU9 116 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 CXorf65A6NEN9 183 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 K7EIM0 57 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 GPR31O00270 319 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 ZNF207O43670 478 aaKnown RBP8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 SNAPC5O75971 98 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 NAT1P18440 290 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 ADMP35318 185 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 RPS19P39019 145 aaKnown RBP8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 DEFB135Q30KP9 77 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 ODF3L2Q3SX64 289 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 Q56UQ5 140 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 SPSB3Q6PJ21 355 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 TSPAN14Q8NG11 270 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 LINC00476Q8WZB0 136 aa8.57□□□□□ -1.04
HMGCS1-204ENST00000507293 PRNDQ9UKY0 176 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms