RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 PRR13Q9NZ81 148 aa4.45□□□□□ -1.7
USP46-206ENST00000506707 FOXA2Q9Y261 457 aaPredicted RBP4.45□□□□□ -1.7
USP46-206ENST00000506707 KCNIP3Q9Y2W7 256 aa4.45□□□□□ -1.7
USP46-206ENST00000506707 TSSC4Q9Y5U2 329 aaPredicted RBP4.45□□□□□ -1.7
USP46-206ENST00000506707 TMEM56-RWDD3S4R434 201 aa4.45□□□□□ -1.7
USP46-206ENST00000506707 TRRAPQ9Y4A5 3859 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 A0A1W2PRX2 142 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 RBMXL2O75526 392 aaKnown RBP4.44□□□□□ -1.7
USP46-206ENST00000506707 SNAPC5O75971 98 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 BRI3O95415 125 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 TCRBP04435 133 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 CRYGCP07315 174 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 PF4V1P10720 104 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 RPL27AP46776 148 aaKnown RBP4.44□□□□□ -1.7
USP46-206ENST00000506707 CDX1P47902 265 aaPredicted RBP4.44□□□□□ -1.7
USP46-206ENST00000506707 ERVK-16P61578 105 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 RPL23AP62750 156 aaKnown RBP4.44□□□□□ -1.7
USP46-206ENST00000506707 ASAH1Q13510 395 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 PPP1R1AQ13522 171 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 KLK9Q2XQG4 91 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 TRIM16LQ309B1 348 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 NSUN5P1Q3KNT7 163 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 ANKRD55Q3KP44 614 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 CXorf66Q5JRM2 361 aaPredicted RBP4.44□□□□□ -1.7
USP46-206ENST00000506707 PRR31Q5SQ13 230 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 TMEM268Q5VZI3 342 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 TMEM65Q6PI78 240 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 H2BFWTQ7Z2G1 175 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 LYZL2Q7Z4W2 148 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 TMED4Q7Z7H5 227 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 ZNF429Q86V71 674 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 ZNF695Q8IW36 515 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 CENPSQ8N2Z9 138 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 TTC9CQ8N5M4 171 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 ZNF491Q8N8L2 437 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 LRTM2Q8N967 370 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 OR10W1Q8NGF6 305 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 OR5M8Q8NGP6 311 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 RBPMSQ93062 196 aaKnown RBP4.44□□□□□ -1.7
USP46-206ENST00000506707 GPR146Q96CH1 333 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 UBE2E2Q96LR5 201 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 MS4A10Q96PG2 267 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 FYTTD1Q96QD9 318 aaKnown RBP4.44□□□□□ -1.7
USP46-206ENST00000506707 TSC22D3Q99576 134 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 SPIN2AQ99865 258 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 SPIN2BQ9BPZ2 258 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 COMMD5Q9GZQ3 224 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 ALX4Q9H161 411 aaPredicted RBP4.44□□□□□ -1.7
USP46-206ENST00000506707 KLK9Q9UKQ9 250 aa4.44□□□□□ -1.7
USP46-206ENST00000506707 TRBV9A0A0B4J1U6 114 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 A0A0B4J2A0 478 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 IGLC7A0M8Q6 106 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 C9orf170A2RU37 121 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 C15orf61A6NNL5 157 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 NPIPB5A8MRT5 1133 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 H3BUA1 57 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 I3L521 148 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 M0QZ24 198 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 ATG12O94817 140 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 SFT2D2O95562 160 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 TSPAN15O95858 294 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 PRH1P02810 166 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 OR4E1P0C645 316 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 TRAPPC2P0DI81 140 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 TRAPPC2BP0DI82 140 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 AREGP15514 252 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 CTRB1P17538 263 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 ANXA7P20073 488 aaKnown RBP4.43□□□□□ -1.7
USP46-206ENST00000506707 VAMP1P23763 118 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 PSMB6P28072 239 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 MECP2P51608 486 aaKnown RBP4.43□□□□□ -1.7
USP46-206ENST00000506707 UBE2MP61081 183 aaKnown RBP4.43□□□□□ -1.7
USP46-206ENST00000506707 HSPE1P61604 102 aaKnown RBP4.43□□□□□ -1.7
USP46-206ENST00000506707 WT1-ASQ06250 92 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 C2orf68Q2NKX9 166 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 AARDQ4LEZ3 155 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 NMSQ5H8A3 153 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 CTRB2Q6GPI1 263 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 C19orf35Q6ZS72 473 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 FAM219AQ8IW50 185 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 LGI3Q8N145 548 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 SLC35G3Q8N808 338 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 DUSP18Q8NEJ0 188 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 OR1L8Q8NGR8 309 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 OR5B3Q8NH48 314 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 OR4A16Q8NH70 328 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 FAM110DQ8TAY7 271 aaPredicted RBP4.43□□□□□ -1.7
USP46-206ENST00000506707 IL22RA2Q969J5 263 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 LSM10Q969L4 123 aaKnown RBP4.43□□□□□ -1.7
USP46-206ENST00000506707 RRNAD1Q96FB5 475 aaKnown RBP4.43□□□□□ -1.7
USP46-206ENST00000506707 FANCD2OSQ96PS1 177 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 PHB2Q99623 299 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 SRSF8Q9BRL6 282 aaKnown RBP4.43□□□□□ -1.7
USP46-206ENST00000506707 QTRT1Q9BXR0 403 aaKnown RBP4.43□□□□□ -1.7
USP46-206ENST00000506707 SLA2Q9H6Q3 261 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 FKBP11Q9NYL4 201 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 SHPKQ9UHJ6 478 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 PRNDQ9UKY0 176 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 ZNF257Q9Y2Q1 563 aa4.43□□□□□ -1.7
USP46-206ENST00000506707 OR51B2Q9Y5P1 312 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms