RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TMEM186Q96B77 213 aa9.86□□□□□ -0.83
LIN54-206ENST00000506560 NEIL1Q96FI4 390 aaPredicted RBP9.86□□□□□ -0.83
LIN54-206ENST00000506560 KIAA1456Q9P272 454 aa9.86□□□□□ -0.83
LIN54-206ENST00000506560 APELAP0DMC3 54 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 NPY1RP25929 384 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 TLE4Q04727 773 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 MRGPRG-AS1Q2M3A8 158 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 HLA-DRB5Q30154 266 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 C19orf35Q6ZS72 473 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 COMMD1Q8N668 190 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 OR4P4Q8NGL7 312 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 BBC3Q96PG8 261 aaPredicted RBP9.85□□□□□ -0.83
LIN54-206ENST00000506560 PARD6GQ9BYG4 376 aaPredicted RBP9.85□□□□□ -0.83
LIN54-206ENST00000506560 WDR83OSQ9Y284 106 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 SCAF4O95104 1147 aaKnown RBP9.85□□□□□ -0.83
LIN54-206ENST00000506560 SERF2P84101 59 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 HABP2Q14520 560 aaPredicted RBP9.85□□□□□ -0.83
LIN54-206ENST00000506560 ATP6V1FQ16864 119 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 TMEM177Q53S58 311 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 CYB561D1Q8N8Q1 229 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 SSMEM1Q8WWF3 244 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 MGST2Q99735 147 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 BET1LQ9NYM9 111 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 POLQO75417 2590 aa9.85□□□□□ -0.83
LIN54-206ENST00000506560 ABCA2Q9BZC7 2435 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 MAP1LC3B2A6NCE7 125 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 ZFP36P26651 326 aaKnown RBP9.84□□□□□ -0.83
LIN54-206ENST00000506560 MEOX2P50222 304 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 ZNF137PP52743 207 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 SNRPEP62304 92 aaKnown RBP9.84□□□□□ -0.83
LIN54-206ENST00000506560 PRCDQ00LT1 54 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 MIC13Q5XKP0 118 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 CENPVQ7Z7K6 275 aaPredicted RBP9.84□□□□□ -0.83
LIN54-206ENST00000506560 LFNGQ8NES3 379 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 OSR1Q8TAX0 266 aaPredicted RBP9.84□□□□□ -0.83
LIN54-206ENST00000506560 MAP1LC3BQ9GZQ8 125 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 ZNF430Q9H8G1 570 aaPredicted RBP9.84□□□□□ -0.83
LIN54-206ENST00000506560 PATZ1Q9HBE1 687 aaKnown RBP9.84□□□□□ -0.83
LIN54-206ENST00000506560 RPS10P5Q9NQ39 176 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 IGHV3-48P01763 117 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 SRP19P09132 144 aaKnown RBP9.84□□□□□ -0.83
LIN54-206ENST00000506560 CD24P25063 80 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 OR10G4Q8NGN3 311 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 OR10G9Q8NGN4 311 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 OR10G7Q8NGN6 311 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 OR4C13Q8NGP0 309 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 RAB1CQ92928 201 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 ISOC2Q96AB3 205 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 SLC35B3Q9H1N7 401 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 PLEKHA3Q9HB20 300 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 SMCO4Q9NRQ5 59 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 MIOXQ9UGB7 285 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 PRNDQ9UKY0 176 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 WASHC3Q9Y3C0 194 aa9.84□□□□□ -0.83
LIN54-206ENST00000506560 BUB1B-PAK6H3BSN5 160 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 REG1AP05451 166 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 IGFBP2P18065 325 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 LGALS4P56470 323 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 LHFPL4Q7Z7J7 247 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 C8orf31Q8N9H6 132 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 MBD3L1Q8WWY6 194 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 RAB39BQ96DA2 213 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 PBDC1Q9BVG4 233 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 CLEC7AQ9BXN2 247 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 CHODLQ9H9P2 273 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 YIF1AO95070 293 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 SNRNP70P08621 437 aaKnown RBP9.83□□□□□ -0.84
LIN54-206ENST00000506560 RPL8P62917 257 aaKnown RBP9.83□□□□□ -0.84
LIN54-206ENST00000506560 AWAT1Q58HT5 328 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 LY6G5BQ8NDX9 201 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 NEU4Q8WWR8 484 aaPredicted RBP9.83□□□□□ -0.84
LIN54-206ENST00000506560 HIST1H2BAQ96A08 127 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 TIMD4Q96H15 378 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 ENY2Q9NPA8 101 aa9.83□□□□□ -0.84
LIN54-206ENST00000506560 IGKV1OR2-108A0A075B7D4 117 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 IGHV1-3A0A0C4DH29 117 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 AGAP20933 346 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 B2MP61769 119 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 WT1-ASQ06250 92 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 DPPA3Q6W0C5 159 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 PDPNQ86YL7 162 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 C8orf46Q8TAG6 207 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 RAB24Q969Q5 203 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 SSBP3Q9BWW4 388 aaPredicted RBP9.82□□□□□ -0.84
LIN54-206ENST00000506560 GGTLC1Q9BX51 225 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 SLC39A9Q9NUM3 307 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 TIMM9Q9Y5J7 89 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 PUS1Q9Y606 427 aaKnown RBP eCLIP9.82□□□□□ -0.84
LIN54-206ENST00000506560 TRAV1-1A0A0B4J248 108 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 LOC102723971A0A1B0GUV8 181 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 TMEM8BA6NDV4 472 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 FSTL3O95633 263 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 GATA2P23769 480 aaPredicted RBP9.82□□□□□ -0.84
LIN54-206ENST00000506560 ZNF506Q5JVG8 444 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 RUSC1-AS1Q66K80 236 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 RBMS3Q6XE24 437 aaKnown RBP9.82□□□□□ -0.84
LIN54-206ENST00000506560 NDUFA4L2Q9NRX3 87 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 HILPDAQ9Y5L2 63 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 KPTNQ9Y664 436 aa9.82□□□□□ -0.84
LIN54-206ENST00000506560 C7orf77A4D0Y5 90 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms