RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 COMMD5Q9GZQ3 224 aa12.6□□□□□ -0.39
PDLIM7-215ENST00000506161 PLEKHA3Q9HB20 300 aa12.6□□□□□ -0.39
PDLIM7-215ENST00000506161 SCPEP1Q9HB40 452 aa12.6□□□□□ -0.39
PDLIM7-215ENST00000506161 RETNQ9HD89 108 aa12.6□□□□□ -0.39
PDLIM7-215ENST00000506161 NDUFA4L2Q9NRX3 87 aa12.6□□□□□ -0.39
PDLIM7-215ENST00000506161 PEMTQ9UBM1 199 aa12.6□□□□□ -0.39
PDLIM7-215ENST00000506161 MLXQ9UH92 298 aa12.6□□□□□ -0.39
PDLIM7-215ENST00000506161 SACSQ9NZJ4 4579 aa12.6□□□□□ -0.39
PDLIM7-215ENST00000506161 LGALS9O00182 355 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 OR13C7P0DN81 318 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 PI3P19957 117 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 GPR183P32249 361 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 RCVRNP35243 200 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 HAGHQ16775 308 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 TATDN3Q17R31 274 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 TM4SF20Q53R12 229 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 LCN12Q6JVE5 192 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 LINC00322Q6ZN03 302 aaPredicted RBP12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 GPHB5Q86YW7 130 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 CD300LFQ8TDQ1 290 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 EEF1AKMT3Q96AZ1 226 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 SEC22AQ96IW7 307 aa12.59□□□□□ -0.39
PDLIM7-215ENST00000506161 STARD9Q9P2P6 4700 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 FAM25AB3EWG3 89 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 FAM25CB3EWG5 89 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 FAM25GB3EWG6 89 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 CLEC3BP05452 202 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 SERPINE2P07093 398 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 TRAPPC2P0DI81 140 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 TRAPPC2BP0DI82 140 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 DEFA4P12838 97 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 CBLN1P23435 193 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 LHFPL1Q86WI0 220 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 SGPP2Q8IWX5 399 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 GDPD1Q8N9F7 314 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 MRGPRFQ96AM1 343 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 HINT2Q9BX68 163 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 EXTL2Q9UBQ6 330 aa12.58□□□□□ -0.4
PDLIM7-215ENST00000506161 SMIM31A0A1B0GVY4 71 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 A8MWP6 167 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 CTDSP2O14595 271 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 CD3DP04234 171 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 HIST1H1BP16401 226 aaKnown RBP12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 ZNF182P17025 639 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 TSPAN5P62079 268 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 LAX1Q8IWV1 398 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 TMEM61Q8N0U2 210 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 DEFB125Q8N687 156 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 OR1L8Q8NGR8 309 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 AIFM2Q9BRQ8 373 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 EDA2RQ9HAV5 297 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 OR51B2Q9Y5P1 312 aa12.57□□□□□ -0.4
PDLIM7-215ENST00000506161 CSMD3Q7Z407 3707 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 RBMY1BA6NDE4 496 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 RBMY1EA6NEQ0 496 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 C15orf61A6NNL5 157 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 K7EIM0 57 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 FGF2P09038 288 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 RBMY1DP0C7P1 496 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 ADMP35318 185 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 UCP3P55916 312 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 CD81P60033 236 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 ERVK-16P61578 105 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 FAM209BQ5JX69 171 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 FAAP20Q6NZ36 180 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 CMTM1Q8IZ96 169 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 UXS1Q8NBZ7 420 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 OR2K2Q8NGT1 345 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 DYNLRB2Q8TF09 96 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 NEURL2Q9BR09 285 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 SRSF8Q9BRL6 282 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 CHRDL1Q9BU40 450 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 MRPS26Q9BYN8 205 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 TMEM14BQ9NUH8 114 aa12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 F11RQ9Y624 299 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-215ENST00000506161 IGHV3OR16-8A0A075B7F1 116 aa12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 TRBV7-1A0A0A6YYK4 115 aa12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 ZNF320A2RRD8 509 aa12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 DHFRP00374 187 aa12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 PTBP1P26599 531 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 SPINK9Q5DT21 86 aa12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 SLC25A24Q6NUK1 477 aa12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 BTNL8Q6UX41 500 aa12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 BORCS5Q969J3 196 aa12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 TP53RKQ96S44 253 aa12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 PALMDQ9NP74 551 aa12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 MTFP1Q9UDX5 166 aa12.55□□□□□ -0.4
PDLIM7-215ENST00000506161 A0A0G2JRQ6 117 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 OR2T8A6NH00 312 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 IGKV1-5P01602 117 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 P0C879 139 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 LYL1P12980 280 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 PPP5CP53041 499 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 GUCA2BQ16661 112 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 MZT2AQ6P582 158 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 GTSCR1Q86UQ5 136 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 CADM3Q8N126 398 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 SCARB1Q8WTV0 552 aa12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 LSM10Q969L4 123 aaKnown RBP12.54□□□□□ -0.4
PDLIM7-215ENST00000506161 CXorf58Q96LI9 332 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms