RNA–Protein interactions for RNA: ENST00000505871.6

SH3D21-205, Transcript of SH3 domain containing 21, humanhuman

TSL 2 BASIC

Gene SH3D21, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-205ENST00000505871 RBFOX3A6NFN3 312 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 PRSS46E5RG02 174 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 IGLV1-47P01700 117 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 LIPFP07098 398 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 IGFBP2P18065 325 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 CD1BP29016 333 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 DLK1P80370 383 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 RELQ04864 619 aaPredicted RBP11.65□□□□□ -0.54
SH3D21-205ENST00000505871 HLA-DRB5Q30154 266 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 ZNF709Q8N972 641 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 SLC24A4Q8NFF2 622 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 OR4A5Q8NH83 315 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 VSTM2AQ8TAG5 236 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 CLEC7AQ9BXN2 247 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 NPCDR1Q9BY65 106 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 WDR83OSQ9Y284 106 aa11.65□□□□□ -0.54
SH3D21-205ENST00000505871 SMG1Q96Q15 3661 aaKnown RBP11.65□□□□□ -0.55
SH3D21-205ENST00000505871 C17orf112F2Z3M2 114 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 C19orf84I3L1E1 186 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 MBP02144 154 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 NPY1RP25929 384 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 ELLP55199 621 aaPredicted RBP11.64□□□□□ -0.55
SH3D21-205ENST00000505871 BEND2Q8NDZ0 799 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 TMEM170AQ8WVE7 144 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 RCC1LQ96I51 464 aaKnown RBP11.64□□□□□ -0.55
SH3D21-205ENST00000505871 PLEKHA3Q9HB20 300 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 PATZ1Q9HBE1 687 aaKnown RBP11.64□□□□□ -0.55
SH3D21-205ENST00000505871 MALRD1Q5VYJ5 2156 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 MPDU1O75352 247 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 HIST1H1BP16401 226 aaKnown RBP11.64□□□□□ -0.55
SH3D21-205ENST00000505871 USF1P22415 310 aaPredicted RBP11.64□□□□□ -0.55
SH3D21-205ENST00000505871 ZNF726P1Q15940 193 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 SLC35B3Q9H1N7 401 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 UBTD1Q9HAC8 227 aa11.64□□□□□ -0.55
SH3D21-205ENST00000505871 SPTBN1Q01082 2364 aaKnown RBP11.63□□□□□ -0.55
SH3D21-205ENST00000505871 TEX50A0A1B0GTY4 177 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 C7orf77A4D0Y5 90 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 SOX15O60248 233 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 MYOD1P15172 320 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 PLA2G5P39877 138 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 ATP5IP56385 69 aaPredicted RBP11.63□□□□□ -0.55
SH3D21-205ENST00000505871 TMEM167AQ8TBQ9 72 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 RBM14Q96PK6 669 aaKnown RBP11.63□□□□□ -0.55
SH3D21-205ENST00000505871 C2orf88Q9BSF0 95 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 HINT2Q9BX68 163 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 GAR1Q9NY12 217 aaKnown RBP11.63□□□□□ -0.55
SH3D21-205ENST00000505871 RELNP78509 3460 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 ELOA3CA0A087WX78 387 aaPredicted RBP11.63□□□□□ -0.55
SH3D21-205ENST00000505871 A6NNC1 897 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 SEC14L6B5MCN3 397 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 C22orf46C9J442 243 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 PKIAP61925 76 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 ZNF787Q6DD87 383 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 ACSM6Q6P461 480 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 C14orf144Q96I85 54 aa11.63□□□□□ -0.55
SH3D21-205ENST00000505871 AMMECR1Q9Y4X0 333 aaPredicted RBP11.63□□□□□ -0.55
SH3D21-205ENST00000505871 BUB1B-PAK6H3BSN5 160 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 CA2P00918 260 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 CDKN1AP38936 164 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 RPL8P62917 257 aaKnown RBP11.62□□□□□ -0.55
SH3D21-205ENST00000505871 SSX2Q16385 188 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 AWAT1Q58HT5 328 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 ZNF506Q5JVG8 444 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 FFAR4Q5NUL3 377 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 CLDND2Q8NHS1 167 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 RARRES2Q99969 163 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 SSBP3Q9BWW4 388 aaPredicted RBP11.62□□□□□ -0.55
SH3D21-205ENST00000505871 TSTD3H0UI37 97 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 IGKV1D-33P01593 117 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 IGKV1-33P01594 117 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 IGLV2-23P01705 113 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 GPR6P46095 362 aaPredicted RBP11.62□□□□□ -0.55
SH3D21-205ENST00000505871 LGALS7P47929 136 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 HNF4GQ14541 408 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 C9orf152Q5JTZ5 239 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 LCN15Q6UWW0 184 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 RPP25LQ8N5L8 163 aaKnown RBP11.62□□□□□ -0.55
SH3D21-205ENST00000505871 COMMD5Q9GZQ3 224 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 ONECUT1Q9UBC0 465 aa11.62□□□□□ -0.55
SH3D21-205ENST00000505871 SMCO3A2RU48 225 aa11.61□□□□□ -0.55
SH3D21-205ENST00000505871 MAP1LC3B2A6NCE7 125 aa11.61□□□□□ -0.55
SH3D21-205ENST00000505871 HAGHQ16775 308 aa11.61□□□□□ -0.55
SH3D21-205ENST00000505871 VMA21Q3ZAQ7 101 aa11.61□□□□□ -0.55
SH3D21-205ENST00000505871 KHDC3LQ587J8 217 aa11.61□□□□□ -0.55
SH3D21-205ENST00000505871 TREML4Q6UXN2 200 aa11.61□□□□□ -0.55
SH3D21-205ENST00000505871 SSX7Q7RTT5 188 aa11.61□□□□□ -0.55
SH3D21-205ENST00000505871 Q8N7P7 452 aa11.61□□□□□ -0.55
SH3D21-205ENST00000505871 OR1L8Q8NGR8 309 aa11.61□□□□□ -0.55
SH3D21-205ENST00000505871 MAP1LC3BQ9GZQ8 125 aa11.61□□□□□ -0.55
SH3D21-205ENST00000505871 SLC39A9Q9NUM3 307 aa11.61□□□□□ -0.55
SH3D21-205ENST00000505871 LOC105371242A0A075B767 164 aa11.6□□□□□ -0.55
SH3D21-205ENST00000505871 FNDC10F2Z333 226 aa11.6□□□□□ -0.55
SH3D21-205ENST00000505871 INS-IGF2F8WCM5 200 aa11.6□□□□□ -0.55
SH3D21-205ENST00000505871 M0R1W7 72 aa11.6□□□□□ -0.55
SH3D21-205ENST00000505871 OPN1MWP04001 364 aa11.6□□□□□ -0.55
SH3D21-205ENST00000505871 HSPB1P04792 205 aaKnown RBP11.6□□□□□ -0.55
SH3D21-205ENST00000505871 OPN1MW2P0DN77 364 aa11.6□□□□□ -0.55
SH3D21-205ENST00000505871 OPN1MW3P0DN78 364 aa11.6□□□□□ -0.55
SH3D21-205ENST00000505871 COX7A1P24310 79 aa11.6□□□□□ -0.55
SH3D21-205ENST00000505871 EFNA4P52798 201 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms