RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 RPSAP08865 295 aaKnown RBP1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 MYL12AP19105 171 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 RPS12P25398 132 aaKnown RBP1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 RPL12P30050 165 aaKnown RBP1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 CDKN2CP42773 168 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 MAP2K4P45985 399 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 CSN1S1P47710 185 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 CEBPGP53567 150 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 MRPS15P82914 257 aaKnown RBP1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 TNFAIP6P98066 277 aaPredicted RBP1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 EMX1Q04741 257 aaPredicted RBP1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 FADDQ13158 208 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 CDK5R1Q15078 307 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 ELOBQ15370 118 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 DYNAPQ8N1N2 210 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 OR1M1Q8NGA1 313 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 GPR32P1Q8NGA4 272 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 RAB8BQ92930 207 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 ITFG2Q969R8 447 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 PPP1R14BQ96C90 147 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 OPTNQ96CV9 577 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 ADAT1Q9BUB4 502 aaKnown RBP1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 MRPS26Q9BYN8 205 aaKnown RBP1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 XPNPEP1Q9NQW7 623 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 C3orf18Q9UK00 162 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 GUCA1BQ9UMX6 200 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 INTS1Q8N201 2190 aaKnown RBP1□□□□□ -2.25
TOPBP1-204ENST00000505804 EVC2Q86UK5 1308 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 IGKV3-7A0A075B6H7 116 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1□□□□□ -2.25
TOPBP1-204ENST00000505804 IGHV1-69-2A0A0G2JMI3 117 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 TRAPPC13A5PLN9 417 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 DISC1C4P0D8 188 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 I3L521 148 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 MRPS14O60783 128 aaKnown RBP1□□□□□ -2.25
TOPBP1-204ENST00000505804 LYPLA2O95372 231 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 MSMBP08118 114 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 RPS17P08708 135 aaKnown RBP1□□□□□ -2.25
TOPBP1-204ENST00000505804 HLA-DMBP28068 263 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 REG1BP48304 166 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 SURF2Q15527 256 aaPredicted RBP1□□□□□ -2.25
TOPBP1-204ENST00000505804 CLVS2Q5SYC1 327 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 LPCAT4Q643R3 524 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 C15orf53Q8NAA6 179 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 OR5B17Q8NGF7 314 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 CHMP6Q96FZ7 201 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 OR8D2Q9GZM6 311 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 OR51I2Q9H344 312 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 AK3Q9UIJ7 227 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 STRCQ7RTU9 1775 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 UNC13AQ9UPW8 1703 aa1□□□□□ -2.25
TOPBP1-204ENST00000505804 KIF24Q5T7B8 1368 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 TMEM210A6NLX4 147 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 TMEM114B3SHH9 223 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 GOLGA6L19H0YKK7 550 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 KCNK1O00180 336 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 DCTN3O75935 186 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 IFNA16P05015 189 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 HIST1H1EP10412 219 aaKnown RBP0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 S100A7P31151 101 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 HOXA6P31267 233 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 CCR7P32248 378 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 EVX1P49640 407 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 OR4D2P58180 307 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 NAA20P61599 178 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 STX5Q13190 355 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 C1orf195Q5TG92 126 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 SYPL2Q5VXT5 272 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 C8orf74Q6P047 294 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 RPS19BP1Q86WX3 136 aaKnown RBP0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 GID4Q8IVV7 300 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 Q8N2B8 174 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 ZNF676Q8N7Q3 588 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 C9orf163Q8N9P6 203 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 ANKRD7Q92527 254 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 DIRAS2Q96HU8 199 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 CCDC42Q96M95 316 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 OR51V1Q9H2C8 321 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 OR51I1Q9H343 314 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 PAQR5Q9NXK6 330 aaPredicted RBP0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 CAMSAP1Q5T5Y3 1602 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 RALGAPA2Q2PPJ7 1873 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 TRANK1O15050 2925 aa0.99□□□□□ -2.25
TOPBP1-204ENST00000505804 EVPLLA8MZ36 301 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 IBA57-AS1B1ANH7 110 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 RPP14O95059 124 aaKnown RBP0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 CTXN2P0C2S0 81 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 UCHL3P15374 230 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 TCL1AP56279 114 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 RAB5BP61020 215 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 LSM6P62312 80 aaKnown RBP0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 FABP9Q0Z7S8 132 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 OR2F1Q13607 317 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 HIST3H3Q16695 136 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 SFXN4Q6P4A7 337 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 ZNF550Q7Z398 422 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 ERMAPQ96PL5 475 aaPredicted RBP0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 PSTPIP2Q9H939 334 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 SLC22A13Q9Y226 551 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 FUT9Q9Y231 359 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms