RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SLC2A9Q9NRM0 540 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 MLXQ9UH92 298 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 RAB22AQ9UL26 194 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 DMRT1Q9Y5R6 373 aa7.37□□□□□ -1.23
NEDD9-210ENST00000505589 VPS13DQ5THJ4 4388 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 TMEM213A2RRL7 107 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 METTL21EPA6NDL7 271 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 TSPAN4O14817 238 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 SOCS1O15524 211 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 RBMXL2O75526 392 aaKnown RBP7.36□□□□□ -1.23
NEDD9-210ENST00000505589 HLA-AP01891 365 aaKnown RBP7.36□□□□□ -1.23
NEDD9-210ENST00000505589 CLEC3BP05452 202 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 CRYGCP07315 174 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 CTXN2P0C2S0 81 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 IL7P13232 177 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 TAS2R20P59543 309 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 ARFRP1Q13795 201 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 ARL6IP1Q15041 203 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 PLET1Q6UQ28 207 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 C15orf40Q8WUR7 153 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 OR2A7Q96R45 310 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 ABHD1Q96SE0 405 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 RARRES2Q99969 163 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 PECRQ9BY49 303 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 CSTL1Q9H114 145 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 DIABLOQ9NR28 239 aa7.36□□□□□ -1.23
NEDD9-210ENST00000505589 CTDSPLO15194 276 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 GSTZ1O43708 216 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-210ENST00000505589 HRASP01112 189 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 HLA-DQB1P01920 261 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 RPL27AP46776 148 aaKnown RBP7.35□□□□□ -1.23
NEDD9-210ENST00000505589 TMEM50BP56557 158 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 MRPS10P82664 201 aaKnown RBP7.35□□□□□ -1.23
NEDD9-210ENST00000505589 IFITM3Q01628 133 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 KLK9Q2XQG4 91 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 TRIQKQ629K1 86 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 BTNL8Q6UX41 500 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 IDO2Q6ZQW0 420 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 SNX29P2Q8IUI4 249 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 LYSMD2Q8IV50 215 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 SMIM4Q8WVI0 70 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 TRIM63Q969Q1 353 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 ARHGAP5-AS1Q96IT6 56 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 ATP6V0BQ99437 205 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 HDHD3Q9BSH5 251 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-210ENST00000505589 CABLES2Q9BTV7 478 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 MAP6D1Q9H9H5 199 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 KLK9Q9UKQ9 250 aa7.35□□□□□ -1.23
NEDD9-210ENST00000505589 TRAV18A0A075B6X5 111 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 A0A0A6YYD4 124 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 IGKV1-6A0A0C4DH72 117 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 MPTX1A8MV57 137 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 GABARAPH6UMI1 98 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 RAB27BO00194 218 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 CD5P06127 495 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 SAA1P0DJI8 122 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-210ENST00000505589 BAK1Q16611 211 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 MRGPRG-AS1Q2M3A8 158 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 ZNF645Q8N7E2 425 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 CACNG8Q8WXS5 425 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 SRSF8Q9BRL6 282 aaKnown RBP7.34□□□□□ -1.23
NEDD9-210ENST00000505589 AUNIPQ9H7T9 357 aa7.34□□□□□ -1.23
NEDD9-210ENST00000505589 FOXI3A8MTJ6 420 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-210ENST00000505589 K7EMT4 169 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 FCGR3BO75015 233 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 ZNF735P0CB33 412 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 CTRB1P17538 263 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 DEFA1P59665 94 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 DEFA3P59666 94 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 PAFAH1B2P68402 229 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 EWSR1Q01844 656 aaKnown RBP eCLIP7.33□□□□□ -1.24
NEDD9-210ENST00000505589 ASAH1Q13510 395 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 RGS21Q2M5E4 152 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 IGSF11Q5DX21 431 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 HACD4Q5VWC8 232 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 CTRB2Q6GPI1 263 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 SPSB3Q6PJ21 355 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 KCTD9Q7L273 389 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 OR10R2Q8NGX6 335 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 OR4S2Q8NH73 311 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 OR4A5Q8NH83 315 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 TMEM167AQ8TBQ9 72 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 RAB3CQ96E17 227 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 FANCD2OSQ96PS1 177 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 HSD17B10Q99714 261 aaKnown RBP7.33□□□□□ -1.24
NEDD9-210ENST00000505589 C11orf68Q9H3H3 251 aaKnown RBP7.33□□□□□ -1.24
NEDD9-210ENST00000505589 SCPEP1Q9HB40 452 aa7.33□□□□□ -1.24
NEDD9-210ENST00000505589 DAZ1Q9NQZ3 744 aaKnown RBP7.33□□□□□ -1.24
NEDD9-210ENST00000505589 RBMX2Q9Y388 322 aaKnown RBP7.33□□□□□ -1.24
NEDD9-210ENST00000505589 HMX3A6NHT5 357 aa7.32□□□□□ -1.24
NEDD9-210ENST00000505589 LINC00473A8K010 186 aa7.32□□□□□ -1.24
NEDD9-210ENST00000505589 TEX22C9J3V5 150 aa7.32□□□□□ -1.24
NEDD9-210ENST00000505589 MFNGO00587 321 aa7.32□□□□□ -1.24
NEDD9-210ENST00000505589 KBTBD11O94819 623 aa7.32□□□□□ -1.24
NEDD9-210ENST00000505589 PTTG1O95997 202 aa7.32□□□□□ -1.24
NEDD9-210ENST00000505589 FCGR3AP08637 254 aa7.32□□□□□ -1.24
NEDD9-210ENST00000505589 HIST1H1DP16402 221 aaKnown RBP7.32□□□□□ -1.24
NEDD9-210ENST00000505589 PRSS3P35030 304 aa7.32□□□□□ -1.24
NEDD9-210ENST00000505589 RPL8P62917 257 aaKnown RBP7.32□□□□□ -1.24
NEDD9-210ENST00000505589 RNASE12Q5GAN4 147 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms