RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 RCL1Q9Y2P8 373 aaKnown RBP6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 F11RQ9Y624 299 aaKnown RBP6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 INMT-MINDY4F8WBC2 141 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 H7C2Y5 167 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 RNASE2P10153 161 aaKnown RBP6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 FXYD3Q14802 87 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 ZNF343Q6P1L6 599 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 DMBX1Q8NFW5 382 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 ABHD5Q8WTS1 349 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 C4orf3Q8WVX3 66 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 CDX1P47902 265 aaPredicted RBP6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 OR1P1Q8NH06 330 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 COQ8AQ8NI60 647 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 UBE2E2Q96LR5 201 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 SEC22CQ9BRL7 303 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 ZNF436Q9C0F3 470 aaPredicted RBP6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 RNF114Q9Y508 228 aa6.43□□□□□ -1.38
CDC42SE2-208ENST00000505065 MYOD1P15172 320 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 AKR1C4P17516 323 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 H2BFSP57053 126 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 VN1R17PQ8TDU5 208 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 PHB2Q99623 299 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 PRR13Q9NZ81 148 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 ALG5Q9Y673 324 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 K7EPK0 472 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 TATDN3Q17R31 274 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 FAM209BQ5JX69 171 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 PRR31Q5SQ13 230 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 ZBTB8BQ8NAP8 495 aaPredicted RBP6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 SMIM8Q96KF7 97 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 SLA2Q9H6Q3 261 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 RBM7Q9Y580 266 aaKnown RBP6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 A0A1W2PN81 502 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 CHRNA7P36544 502 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 RPL27AP46776 148 aaKnown RBP6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 TMEM95Q3KNT9 176 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 OR2B11Q5JQS5 317 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 TMEM14EPQ6UXP3 125 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 KLHDC1Q8N7A1 406 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 OR11H7Q8NGC8 314 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 OR1L6Q8NGR2 347 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 ENKURQ8TC29 256 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 SPIN2AQ99865 258 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 SPIN2BQ9BPZ2 258 aa6.42□□□□□ -1.38
CDC42SE2-208ENST00000505065 K7EIM0 57 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 HIST1H1BP16401 226 aaKnown RBP6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 RPL23AP62750 156 aaKnown RBP6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 H2BFWTQ7Z2G1 175 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 C12orf45Q8N5I9 185 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 CSPG4Q6UVK1 2322 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 TMEM50AO95807 157 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 INPP1P49441 399 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 SRSF2Q01130 221 aaKnown RBP6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 C10orf55Q5SWW7 151 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 OR2T6Q8NHC8 308 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 USMG5Q96IX5 58 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 TXN2Q99757 166 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 MGAT4CQ9UBM8 478 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 TRAV6A0A075B6T7 132 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 KRASP01116 189 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 AREGP15514 252 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 ERVK-16P61578 105 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 PLET1Q6UQ28 207 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 C10orf99Q6UWK7 81 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 ZNF695Q8IW36 515 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 C2orf50Q96LR7 162 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 P2RX4Q99571 388 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 SH2D7A6NKC9 451 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 C15orf62A8K5M9 175 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 HES1Q14469 280 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 ZNF502Q8TBZ5 544 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 NOL4LQ96MY1 436 aaPredicted RBP6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 DUX5Q96PT3 197 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 RBKSQ9H477 322 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 CACNG5Q9UF02 275 aa6.41□□□□□ -1.38
CDC42SE2-208ENST00000505065 MSGN1A6NI15 193 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 TSC22D2O75157 780 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 ADAP1O75689 374 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 RAB9AP51151 201 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 CCDC140Q96MF4 163 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 TNCP24821 2201 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 TEP1Q99973 2627 aaKnown RBP6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 PSMB11A5LHX3 300 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 NCBP2LA6PVI3 153 aaKnown RBP6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 G3V318 75 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 MBPP02686 304 aaPredicted RBP6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 TEX38Q6PEX7 206 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 TMED4Q7Z7H5 227 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 WFDC9Q8NEX5 89 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 RNASEH2CQ8TDP1 164 aaKnown RBP6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 PARD6GQ9BYG4 376 aaPredicted RBP6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 SIGLEC8Q9NYZ4 499 aa6.4□□□□□ -1.38
CDC42SE2-208ENST00000505065 TRAV14DV4A0A0A6YYC5 116 aa6.4□□□□□ -1.39
CDC42SE2-208ENST00000505065 HNF4GQ14541 408 aa6.4□□□□□ -1.39
CDC42SE2-208ENST00000505065 KPRPQ5T749 579 aaPredicted RBP6.4□□□□□ -1.39
CDC42SE2-208ENST00000505065 OR10W1Q8NGF6 305 aa6.4□□□□□ -1.39
CDC42SE2-208ENST00000505065 TAF15Q92804 592 aaKnown RBP eCLIP6.4□□□□□ -1.39
CDC42SE2-208ENST00000505065 RNF126Q9BV68 326 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms