RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 CGAP01215 116 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 PSG7Q13046 419 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 NSUN5P1Q3KNT7 163 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 JMJD8Q96S16 334 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 PSMG3Q9BT73 122 aaPredicted RBP6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 GGACTQ9BVM4 153 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 XIRP1Q702N8 1843 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 NMBP08949 121 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 MRPL14Q6P1L8 145 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 BIVMQ86UB2 503 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 GATAD1Q8WUU5 269 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 IMMP1LQ96LU5 166 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 PMCHL2Q9BQD1 86 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 TMEM160Q9NX00 188 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 PQLC2LA1A4F0 135 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 NPIPB9F8W1W9 429 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 NPIPB7O75200 414 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 COTL1Q14019 142 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 LY6DQ14210 128 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 ZXDCQ2QGD7 858 aaPredicted RBP6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 SPRR3Q9UBC9 169 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 A0A0G2JK05 382 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 BEX4Q9NWD9 120 aaPredicted RBP6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 SAA2-SAA4A0A096LPE2 208 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 PEX7O00628 323 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 NBR2O15453 112 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 SAA2P0DJI9 122 aaPredicted RBP6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 ZNF385CQ66K41 422 aaPredicted RBP6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 SLC25A34Q6PIV7 304 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 PRELID3AQ96N28 172 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 MRPL13Q9BYD1 178 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 MTCL1Q9Y4B5 1905 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 C2orf68Q2NKX9 166 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 SPACA3Q8IXA5 215 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 PUSL1Q8N0Z8 303 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 VWCEQ96DN2 955 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 NPFFR1Q9GZQ6 430 aa6.04□□□□□ -1.44
SYNPO2-205ENST00000504178 TCRBV4S1A1TA0A5B7 111 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 GRIFINA4D1Z8 144 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 CDX1P47902 265 aaPredicted RBP6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 LDLRAD2Q5SZI1 272 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 TMEM170BQ5T4T1 132 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 RNASEH2CQ8TDP1 164 aaKnown RBP6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 PRSS22Q9GZN4 317 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 SCO2A0A1W2PP80 73 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 NBEAP1P0C6P0 100 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 FHITP49789 147 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 C12orf54Q6X4T0 127 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 PLPPR1Q8TBJ4 325 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 Q9H3A6 140 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 UQCR10Q9UDW1 63 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 TRGV2A0A075B6R0 118 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 IGHV3OR16-8A0A075B7F1 116 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 SAA1P0DJI8 122 aaPredicted RBP6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 CSRP1P21291 193 aaKnown RBP6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 OR52E5Q8NH55 327 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 DMRTA2Q96SC8 542 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 ZFC3H1O60293 1989 aaKnown RBP6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 A0A0G2JMZ2 1700 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 LRRC37A2A6NM11 1700 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 H3BRM9 83 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 TBR1Q16650 682 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 ZNF506Q5JVG8 444 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 CFAP161Q6P656 301 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 ZNF837Q96EG3 531 aaPredicted RBP6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 WFIKKN1Q96NZ8 548 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 IGHV1-18A0A0C4DH31 117 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 MUC21A0A0G2JKD1 596 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 MUC21A0A140T8X8 626 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 CXorf65A6NEN9 183 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 EGR1P18146 543 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 CSRP3P50461 194 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 MUC21Q5SSG8 566 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 MIR17HGQ75NE6 70 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 ATOH7Q8N100 152 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 OR11H4Q8NGC9 324 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 RPRMQ9NS64 109 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 METRNQ9UJH8 293 aa6.03□□□□□ -1.44
SYNPO2-205ENST00000504178 MSGN1A6NI15 193 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 CCL3L1P16619 93 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 LINC00114Q6XXX2 140 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 REPIN1Q9BWE0 567 aaKnown RBP6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 AICDAQ9GZX7 198 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 RPP21Q9H633 154 aaKnown RBP6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 PINLYPA6NC86 204 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 TFF1P04155 84 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 TDGF1P13385 188 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 PLP1P60201 277 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 TMEM167AQ8TBQ9 72 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 SCGB3A1Q96QR1 104 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 RTBDNQ9BSG5 229 aaPredicted RBP6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 IL36BQ9NZH7 164 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 FAM71F2Q6NXP2 309 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 DNAL4O96015 105 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 MALP21145 153 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 GPX4P36969 197 aaPredicted RBP6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 CACNG7P62955 275 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 REC114Q7Z4M0 266 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 GLMPQ8WWB7 406 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 C18orf15Q96N68 181 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms