RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 COA4Q9NYJ1 87 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 PRR13Q9NZ81 148 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 ZNF257Q9Y2Q1 563 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 A0A0B4J293 547 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 A0A0B4J2A0 478 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 A0A0G2JRQ6 117 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 DUXBA0A1W2PPF3 345 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 DBX1A6NMT0 343 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 NPIPB5A8MRT5 1133 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 NUDT19A8MXV4 375 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 TRGV3P03979 118 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 CRYGCP07315 174 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 OR4E1P0C645 316 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 ANXA7P20073 488 aaKnown RBP8.67□□□□□ -1.02
VCAN-205ENST00000503923 PSMB6P28072 239 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 RAB25P57735 213 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 TPPP2P59282 170 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 DEFA1P59665 94 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 DEFA3P59666 94 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 HSPE1P61604 102 aaKnown RBP8.67□□□□□ -1.02
VCAN-205ENST00000503923 KIAA0141Q14154 515 aaPredicted RBP8.67□□□□□ -1.02
VCAN-205ENST00000503923 IZUMO4Q1ZYL8 232 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 PRR31Q5SQ13 230 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 ZNF429Q86V71 674 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 SLC35G3Q8N808 338 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 ZNF491Q8N8L2 437 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 LRTM2Q8N967 370 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 KLHL30-AS1Q8NEE0 82 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 ENKURQ8TC29 256 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 CASTOR1Q8WTX7 329 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 UBE2E2Q96LR5 201 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 PDCD10Q9BUL8 212 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 HINT2Q9BX68 163 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 ALX4Q9H161 411 aaPredicted RBP8.67□□□□□ -1.02
VCAN-205ENST00000503923 SHPKQ9UHJ6 478 aa8.67□□□□□ -1.02
VCAN-205ENST00000503923 TRRAPQ9Y4A5 3859 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 TRAV6A0A075B6T7 132 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 A0A0G2JLM5 398 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 IGLC7A0M8Q6 106 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 C9orf170A2RU37 121 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 TSPAN15O95858 294 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 DHFRP00374 187 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 HLA-AP01891 365 aaKnown RBP8.66□□□□□ -1.02
VCAN-205ENST00000503923 AREGP15514 252 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 CTRB1P17538 263 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 PRCDQ00LT1 54 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 DHRS2Q13268 280 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 ANKRD55Q3KP44 614 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 C4orf46Q504U0 113 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 CTRB2Q6GPI1 263 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 LYZL2Q7Z4W2 148 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 LYG2Q86SG7 212 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 MRPL41Q8IXM3 137 aaKnown RBP8.66□□□□□ -1.02
VCAN-205ENST00000503923 COQ8AQ8NI60 647 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 C4orf3Q8WVX3 66 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 GPR146Q96CH1 333 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.66□□□□□ -1.02
VCAN-205ENST00000503923 NUDT15Q9NV35 164 aa8.66□□□□□ -1.02
VCAN-205ENST00000503923 C13orf42A0A1B0GVH6 325 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 FAM223BA6NKX1 122 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 ST8SIA3O43173 380 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 IFNA17P01571 189 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 REG1AP05451 166 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 H2AFB2P0C5Z0 115 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 SULT1A3P0DMM9 295 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 SULT1A4P0DMN0 295 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 OR13C7P0DN81 318 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 DEFA4P12838 97 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 MECP2P51608 486 aaKnown RBP8.65□□□□□ -1.02
VCAN-205ENST00000503923 WT1-ASQ06250 92 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 NMSQ5H8A3 153 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 Q6ZRM9 215 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 C18orf65Q6ZTR6 163 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 C8orf86Q6ZUL3 223 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 FAM223AQ8IWN6 122 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 OR10W1Q8NGF6 305 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 USMG5Q96IX5 58 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 GNB4Q9HAV0 340 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 PLEKHA3Q9HB20 300 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 CACNG5Q9UF02 275 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 CACFD1Q9UGQ2 172 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 TMED3Q9Y3Q3 217 aa8.65□□□□□ -1.02
VCAN-205ENST00000503923 WNK1Q9H4A3 2382 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 TRBV9A0A0B4J1U6 114 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 CYB5BO43169 146 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 DUS4LO95620 317 aaKnown RBP8.64□□□□□ -1.03
VCAN-205ENST00000503923 PF4P02776 101 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 PRH1P02810 166 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 LGALS1P09382 135 aaKnown RBP8.64□□□□□ -1.03
VCAN-205ENST00000503923 HIST1H1BP16401 226 aaKnown RBP8.64□□□□□ -1.03
VCAN-205ENST00000503923 MYCNOSP40205 109 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 RHOGP84095 191 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 RUNX1Q01196 453 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 SMCO1Q147U7 214 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 KLK9Q2XQG4 91 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 AARDQ4LEZ3 155 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 TREML4Q6UXN2 200 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 NRARPQ7Z6K4 114 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 NECAP1Q8NC96 275 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 DUSP18Q8NEJ0 188 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms