RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 TRAPPC2BP0DI82 140 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 G6PCP35575 357 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 TSPAN5P62079 268 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 PHLDA2Q53GA4 152 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 SNX29P2Q8IUI4 249 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 LYSMD2Q8IV50 215 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 DEFB125Q8N687 156 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 OR1L8Q8NGR8 309 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 GPX8Q8TED1 209 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 HINT2Q9BX68 163 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 WFDC10AQ9H1F0 79 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 NSG2Q9Y328 171 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 CEPT1Q9Y6K0 416 aa14.66□□□□□ -0.06
UBE2D3-215ENST00000503418 IGHV3-35A0A0C4DH35 117 aa14.65□□□□□ -0.06
UBE2D3-215ENST00000503418 TEX50A0A1B0GTY4 177 aa14.65□□□□□ -0.06
UBE2D3-215ENST00000503418 APOA1P02647 267 aa14.65□□□□□ -0.06
UBE2D3-215ENST00000503418 IFNA6P05013 189 aa14.65□□□□□ -0.06
UBE2D3-215ENST00000503418 OR13C7P0DN81 318 aa14.65□□□□□ -0.06
UBE2D3-215ENST00000503418 ZNF57Q68EA5 555 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-215ENST00000503418 ZFAND6Q6FIF0 208 aa14.65□□□□□ -0.06
UBE2D3-215ENST00000503418 THOC7Q6I9Y2 204 aaKnown RBP14.65□□□□□ -0.06
UBE2D3-215ENST00000503418 GDPD1Q8N9F7 314 aa14.65□□□□□ -0.06
UBE2D3-215ENST00000503418 UXS1Q8NBZ7 420 aa14.65□□□□□ -0.06
UBE2D3-215ENST00000503418 ZNF502Q8TBZ5 544 aa14.65□□□□□ -0.06
UBE2D3-215ENST00000503418 A8MWP6 167 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 OR11H12B2RN74 326 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 HPGDSO60760 199 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 SNAPC5O75971 98 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 WT1-ASQ06250 92 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 ZNF585BQ52M93 769 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 SLC25A24Q6NUK1 477 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 PLET1Q6UQ28 207 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 UNQ9165/PRO28630Q6UXU0 137 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 CMTM3Q96MX0 182 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 SRD5A3Q9H8P0 318 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 EDA2RQ9HAV5 297 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 RETNQ9HD89 108 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 MLXQ9UH92 298 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 OR51B2Q9Y5P1 312 aa14.64□□□□□ -0.07
UBE2D3-215ENST00000503418 SERPINE2P07093 398 aa14.63□□□□□ -0.07
UBE2D3-215ENST00000503418 ELK1P19419 428 aa14.63□□□□□ -0.07
UBE2D3-215ENST00000503418 PTBP1P26599 531 aaKnown RBP eCLIP14.63□□□□□ -0.07
UBE2D3-215ENST00000503418 S100GP29377 79 aa14.63□□□□□ -0.07
UBE2D3-215ENST00000503418 RCVRNP35243 200 aa14.63□□□□□ -0.07
UBE2D3-215ENST00000503418 TM4SF20Q53R12 229 aa14.63□□□□□ -0.07
UBE2D3-215ENST00000503418 BTNL8Q6UX41 500 aa14.63□□□□□ -0.07
UBE2D3-215ENST00000503418 HSD17B13Q7Z5P4 300 aaPredicted RBP14.63□□□□□ -0.07
UBE2D3-215ENST00000503418 TMEM61Q8N0U2 210 aa14.63□□□□□ -0.07
UBE2D3-215ENST00000503418 LSM10Q969L4 123 aaKnown RBP14.63□□□□□ -0.07
UBE2D3-215ENST00000503418 SCPEP1Q9HB40 452 aa14.63□□□□□ -0.07
UBE2D3-215ENST00000503418 IGHV3-21A0A0B4J1V1 117 aa14.62□□□□□ -0.07
UBE2D3-215ENST00000503418 FAM25AB3EWG3 89 aa14.62□□□□□ -0.07
UBE2D3-215ENST00000503418 FAM25CB3EWG5 89 aa14.62□□□□□ -0.07
UBE2D3-215ENST00000503418 FAM25GB3EWG6 89 aa14.62□□□□□ -0.07
UBE2D3-215ENST00000503418 SCAF4O95104 1147 aaKnown RBP14.62□□□□□ -0.07
UBE2D3-215ENST00000503418 RORCP51449 518 aa14.62□□□□□ -0.07
UBE2D3-215ENST00000503418 LPCAT3Q6P1A2 487 aa14.62□□□□□ -0.07
UBE2D3-215ENST00000503418 SLC16A13Q7RTY0 426 aa14.62□□□□□ -0.07
UBE2D3-215ENST00000503418 VN1R17PQ8TDU5 208 aa14.62□□□□□ -0.07
UBE2D3-215ENST00000503418 NDUFA4L2Q9NRX3 87 aa14.62□□□□□ -0.07
UBE2D3-215ENST00000503418 RBMY1BA6NDE4 496 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 RBMY1EA6NEQ0 496 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 OR2T8A6NH00 312 aa14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 TGOLN2O43493 480 aa14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 RBMY1DP0C7P1 496 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 RNASE12Q5GAN4 147 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 LINC00322Q6ZN03 302 aaPredicted RBP14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 TBC1D26Q86UD7 250 aa14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 OR52B4Q8NGK2 314 aa14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 FAM110AQ9BQ89 295 aa14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 HIPK2Q9H2X6 1198 aa14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 PRNDQ9UKY0 176 aa14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 UFC1Q9Y3C8 167 aa14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 F11RQ9Y624 299 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-215ENST00000503418 MFAP2P55001 183 aa14.6□□□□□ -0.07
UBE2D3-215ENST00000503418 MZT2AQ6P582 158 aa14.6□□□□□ -0.07
UBE2D3-215ENST00000503418 SLC38A6Q8IZM9 456 aa14.6□□□□□ -0.07
UBE2D3-215ENST00000503418 MARC2Q969Z3 335 aa14.6□□□□□ -0.07
UBE2D3-215ENST00000503418 TMEM56Q96MV1 263 aa14.6□□□□□ -0.07
UBE2D3-215ENST00000503418 TSC22D3Q99576 134 aa14.6□□□□□ -0.07
UBE2D3-215ENST00000503418 NAA50Q9GZZ1 169 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-215ENST00000503418 FKBP11Q9NYL4 201 aa14.6□□□□□ -0.07
UBE2D3-215ENST00000503418 M0QYG6 137 aa14.59□□□□□ -0.07
UBE2D3-215ENST00000503418 RBPMS2Q6ZRY4 209 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-215ENST00000503418 CADM3Q8N126 398 aa14.59□□□□□ -0.07
UBE2D3-215ENST00000503418 UBAC2Q8NBM4 344 aa14.59□□□□□ -0.07
UBE2D3-215ENST00000503418 OR5B3Q8NH48 314 aa14.59□□□□□ -0.07
UBE2D3-215ENST00000503418 ZNF436Q9C0F3 470 aaPredicted RBP14.59□□□□□ -0.07
UBE2D3-215ENST00000503418 MRPL27Q9P0M9 148 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-215ENST00000503418 DYNC2H1Q8NCM8 4307 aaKnown RBP14.58□□□□□ -0.07
UBE2D3-215ENST00000503418 DBX1A6NMT0 343 aa14.58□□□□□ -0.08
UBE2D3-215ENST00000503418 C15orf61A6NNL5 157 aa14.58□□□□□ -0.08
UBE2D3-215ENST00000503418 UCP3P55916 312 aa14.58□□□□□ -0.08
UBE2D3-215ENST00000503418 H2BFWTQ7Z2G1 175 aa14.58□□□□□ -0.08
UBE2D3-215ENST00000503418 TMEM190Q8WZ59 177 aa14.58□□□□□ -0.08
UBE2D3-215ENST00000503418 AP3S1Q92572 193 aa14.58□□□□□ -0.08
UBE2D3-215ENST00000503418 BSCL2Q96G97 398 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-215ENST00000503418 FAM212BQ9NTI7 297 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-215ENST00000503418 TMEM14BQ9NUH8 114 aa14.58□□□□□ -0.08
UBE2D3-215ENST00000503418 GAR1Q9NY12 217 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms