RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 TMEM56-RWDD3S4R434 201 aa12.83□□□□□ -0.36
SCLT1-205ENST00000503401 A0A0B4J293 547 aa12.82□□□□□ -0.36
SCLT1-205ENST00000503401 ATG12O94817 140 aa12.82□□□□□ -0.36
SCLT1-205ENST00000503401 ANXA3P12429 323 aa12.82□□□□□ -0.36
SCLT1-205ENST00000503401 SLC6A1P30531 599 aa12.82□□□□□ -0.36
SCLT1-205ENST00000503401 CDX1P47902 265 aaPredicted RBP12.82□□□□□ -0.36
SCLT1-205ENST00000503401 PRR31Q5SQ13 230 aa12.82□□□□□ -0.36
SCLT1-205ENST00000503401 Q6ZRM9 215 aa12.82□□□□□ -0.36
SCLT1-205ENST00000503401 TTC9CQ8N5M4 171 aa12.82□□□□□ -0.36
SCLT1-205ENST00000503401 SLC35G3Q8N808 338 aa12.82□□□□□ -0.36
SCLT1-205ENST00000503401 OR1L8Q8NGR8 309 aa12.82□□□□□ -0.36
SCLT1-205ENST00000503401 C20orf85Q9H1P6 137 aa12.82□□□□□ -0.36
SCLT1-205ENST00000503401 NBEAL1Q6ZS30 2694 aa12.82□□□□□ -0.36
SCLT1-205ENST00000503401 TRAV6A0A075B6T7 132 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 IGLC7A0M8Q6 106 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 IGHV3-11P01762 117 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 FGF2P09038 288 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 TRAPPC2P0DI81 140 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 TRAPPC2BP0DI82 140 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 ASAH1Q13510 395 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 ANKRD55Q3KP44 614 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 SPINK9Q5DT21 86 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 OR4F17Q8NGA8 305 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 OR4F4Q96R69 305 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 ALX4Q9H161 411 aaPredicted RBP12.81□□□□□ -0.36
SCLT1-205ENST00000503401 NDUFA4L2Q9NRX3 87 aa12.81□□□□□ -0.36
SCLT1-205ENST00000503401 SFT2D2O95562 160 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 TCRBP04435 133 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 PSMB6P28072 239 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 TREML4Q6UXN2 200 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 LYZL2Q7Z4W2 148 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 GPR146Q96CH1 333 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 UBE2E2Q96LR5 201 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 SLA2Q9H6Q3 261 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 FKBP11Q9NYL4 201 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 FAM240BA0A1B0GVZ2 78 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 NPIPB5A8MRT5 1133 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 HLA-AP01891 365 aaKnown RBP12.8□□□□□ -0.36
SCLT1-205ENST00000503401 WT1-ASQ06250 92 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 MZT2BQ6NZ67 158 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 LGI3Q8N145 548 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 OR5B3Q8NH48 314 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 IL22RA2Q969J5 263 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 NUDT15Q9NV35 164 aa12.8□□□□□ -0.36
SCLT1-205ENST00000503401 NOTCH3Q9UM47 2321 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 H3BUA1 57 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 ST8SIA3O43173 380 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 OR4E1P0C645 316 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 OR13C7P0DN81 318 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 CTRB1P17538 263 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 MECP2P51608 486 aaKnown RBP12.79□□□□□ -0.36
SCLT1-205ENST00000503401 CTRB2Q6GPI1 263 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 ETV3LQ6ZN32 361 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 C4orf3Q8WVX3 66 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 RAX2Q96IS3 184 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 CACNG5Q9UF02 275 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 ZNF257Q9Y2Q1 563 aa12.79□□□□□ -0.36
SCLT1-205ENST00000503401 A0A0B4J2A0 478 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 C9orf170A2RU37 121 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 OR2J3O76001 311 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 NXPH3O95157 252 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 PF4P02776 101 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 CRYGCP07315 174 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 RAB25P57735 213 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 UBE2MP61081 183 aaKnown RBP12.78□□□□□ -0.36
SCLT1-205ENST00000503401 HSPE1P61604 102 aaKnown RBP12.78□□□□□ -0.36
SCLT1-205ENST00000503401 SRPXP78539 464 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 RHOGP84095 191 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 DHRS2Q13268 280 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 C4orf46Q504U0 113 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 ZNF429Q86V71 674 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 FAM219AQ8IW50 185 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 OR52B4Q8NGK2 314 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 LSM10Q969L4 123 aaKnown RBP12.78□□□□□ -0.36
SCLT1-205ENST00000503401 SHPKQ9UHJ6 478 aa12.78□□□□□ -0.36
SCLT1-205ENST00000503401 I3L521 148 aa12.77□□□□□ -0.36
SCLT1-205ENST00000503401 IFNA17P01571 189 aa12.77□□□□□ -0.36
SCLT1-205ENST00000503401 DEFA4P12838 97 aa12.77□□□□□ -0.36
SCLT1-205ENST00000503401 PRCDQ00LT1 54 aa12.77□□□□□ -0.36
SCLT1-205ENST00000503401 NMSQ5H8A3 153 aa12.77□□□□□ -0.36
SCLT1-205ENST00000503401 FANCD2OSQ96PS1 177 aa12.77□□□□□ -0.36
SCLT1-205ENST00000503401 C13orf42A0A1B0GVH6 325 aa12.77□□□□□ -0.37
SCLT1-205ENST00000503401 CCL24O00175 119 aa12.77□□□□□ -0.37
SCLT1-205ENST00000503401 THOC7Q6I9Y2 204 aaKnown RBP12.77□□□□□ -0.37
SCLT1-205ENST00000503401 LYG2Q86SG7 212 aa12.77□□□□□ -0.37
SCLT1-205ENST00000503401 OR11H1Q8NG94 326 aa12.77□□□□□ -0.37
SCLT1-205ENST00000503401 ENKURQ8TC29 256 aa12.77□□□□□ -0.37
SCLT1-205ENST00000503401 SRSF8Q9BRL6 282 aaKnown RBP12.77□□□□□ -0.37
SCLT1-205ENST00000503401 DMRT1Q9Y5R6 373 aa12.77□□□□□ -0.37
SCLT1-205ENST00000503401 TRBV9A0A0B4J1U6 114 aa12.76□□□□□ -0.37
SCLT1-205ENST00000503401 BRI3O95415 125 aa12.76□□□□□ -0.37
SCLT1-205ENST00000503401 HOXB5P09067 269 aa12.76□□□□□ -0.37
SCLT1-205ENST00000503401 LGALS1P09382 135 aaKnown RBP12.76□□□□□ -0.37
SCLT1-205ENST00000503401 NRARPQ7Z6K4 114 aa12.76□□□□□ -0.37
SCLT1-205ENST00000503401 LRTM2Q8N967 370 aa12.76□□□□□ -0.37
SCLT1-205ENST00000503401 PDCD10Q9BUL8 212 aa12.76□□□□□ -0.37
SCLT1-205ENST00000503401 PLEKHA3Q9HB20 300 aa12.76□□□□□ -0.37
SCLT1-205ENST00000503401 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.76□□□□□ -0.37
SCLT1-205ENST00000503401 S4R3C0 116 aa12.76□□□□□ -0.37
SCLT1-205ENST00000503401 A0A0G2JLM5 398 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms