RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 HINT2Q9BX68 163 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 PSORS1C1Q9UIG5 152 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 RAB22AQ9UL26 194 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 OR2W1Q9Y3N9 320 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 ETV7Q9Y603 341 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 AGRNO00468 2067 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 ELOA3CA0A087WX78 387 aaPredicted RBP6.61□□□□□ -1.35
CCDC171-209ENST00000498725 DEFB131BA0A096LNP1 70 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 IGHV7-4-1A0A0J9YVY3 117 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 MFNGO00587 321 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 CHEK1O14757 476 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 IGLV2-14P01704 120 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 HLA-DQB1P01920 261 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 P0DMU3 169 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 FAM231AP0DMU4 169 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 FAM231CP0DMU5 169 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 OR13C7P0DN81 318 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 HIST1H1DP16402 221 aaKnown RBP6.61□□□□□ -1.35
CCDC171-209ENST00000498725 CALRP27797 417 aaKnown RBP6.61□□□□□ -1.35
CCDC171-209ENST00000498725 CMC4P56277 68 aaPredicted RBP6.61□□□□□ -1.35
CCDC171-209ENST00000498725 DEFB131AP59861 70 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 RPS25P62851 125 aaKnown RBP6.61□□□□□ -1.35
CCDC171-209ENST00000498725 LAIR2Q6ISS4 152 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 TMEM91Q6ZNR0 172 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 UBE2DNLQ8IWF7 75 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 STHQ8IWL8 128 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 DHRSXQ8N5I4 330 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 VN1R17PQ8TDU5 208 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 CMTM3Q96MX0 182 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 HSD17B10Q99714 261 aaKnown RBP6.61□□□□□ -1.35
CCDC171-209ENST00000498725 RNF126Q9BV68 326 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 MND1Q9BWT6 205 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 COMMD5Q9GZQ3 224 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 S100A14Q9HCY8 104 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 CLEC5AQ9NY25 188 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 CELA1Q9UNI1 258 aa6.61□□□□□ -1.35
CCDC171-209ENST00000498725 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
CCDC171-209ENST00000498725 IGHV3-66A0A0C4DH42 116 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 PTGES3LE9PB15 166 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 K7EMT4 169 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 DNASE2O00115 360 aaPredicted RBP6.6□□□□□ -1.35
CCDC171-209ENST00000498725 SULT1C2O00338 296 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 NUPL2O15504 423 aaKnown RBP6.6□□□□□ -1.35
CCDC171-209ENST00000498725 CYB5BO43169 146 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 DIRAS3O95661 229 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 IFNA10P01566 189 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 GNAO1P09471 354 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 HSMCR30P0CW71 290 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 RPL11P62913 178 aaKnown RBP6.6□□□□□ -1.35
CCDC171-209ENST00000498725 KLK9Q2XQG4 91 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 SPSB3Q6PJ21 355 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 TCF24Q7RTU0 167 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 SPAG16Q8N0X2 631 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 FAM24BQ8N5W8 94 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 DMBX1Q8NFW5 382 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 SECTM1Q8WVN6 248 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 ATG5Q9H1Y0 275 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 HRH4Q9H3N8 390 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 CCL28Q9NRJ3 127 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 BET1LQ9NYM9 111 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 C21orf62Q9NYP8 219 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 KLK9Q9UKQ9 250 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 V9GY05 133 aa6.6□□□□□ -1.35
CCDC171-209ENST00000498725 C15orf61A6NNL5 157 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 C15orf62A8K5M9 175 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 UPK2O00526 184 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 ST8SIA3O43173 380 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 SLC22A5O76082 557 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 IGHV3-48P01763 117 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 SERPINE2P07093 398 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 TRAPPC2P0DI81 140 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 TRAPPC2BP0DI82 140 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 OR10A3P58181 314 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 PAFAH1B2P68402 229 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 WT1-ASQ06250 92 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 EIF4EBP1Q13541 118 aaPredicted RBP6.59□□□□□ -1.35
CCDC171-209ENST00000498725 SPHARQ15513 63 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 CDNFQ49AH0 187 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 C8orf59Q8N0T1 100 aaPredicted RBP6.59□□□□□ -1.35
CCDC171-209ENST00000498725 GDPD1Q8N9F7 314 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 SCARB1Q8WTV0 552 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 UFD1Q92890 307 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 NDUFAF3Q9BU61 184 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 QTRT1Q9BXR0 403 aaKnown RBP6.59□□□□□ -1.35
CCDC171-209ENST00000498725 RABAC1Q9UI14 185 aa6.59□□□□□ -1.35
CCDC171-209ENST00000498725 TEX50A0A1B0GTY4 177 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 KNCNA6PVL3 124 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 C16orf90A8MZG2 172 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 F8W735 103 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-209ENST00000498725 ARL6IP5O75915 188 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 IFNA21P01568 189 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 IFNA17P01571 189 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 AMBPP02760 352 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 EIF4EP06730 217 aaKnown RBP6.58□□□□□ -1.36
CCDC171-209ENST00000498725 PTHLHP12272 177 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 MIFP14174 115 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 C12orf74Q32Q52 190 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 LGALS9BQ3B8N2 356 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 ZNF66Q6ZN08 573 aa6.58□□□□□ -1.36
CCDC171-209ENST00000498725 NUDCD2Q8WVJ2 157 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms