RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 SPANXN5Q5MJ07 72 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 FFAR4Q5NUL3 377 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 TPTE2P1Q5T6R2 138 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 NUFIP2Q7Z417 695 aaKnown RBP3.21□□□□□ -1.9
CLTC-209ENST00000498711 PNKDQ8N490 385 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 OR10P1Q8NGE3 313 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 IL17DQ8TAD2 202 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 ZNF488Q96MN9 340 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 FAM110AQ9BQ89 295 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 RTL8AQ9BWD3 113 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 FKBP11Q9NYL4 201 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 IL17BQ9UHF5 180 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 NAGKQ9UJ70 344 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 CACNA1CQ13936 2221 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 TRGV8A0A0C4DH27 118 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 UBE2L5PA0A1B0GUS4 154 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 C17orf98A8MV24 154 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 H3BP45 60 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 K7ENP7 123 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 PROP1O75360 226 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 CGB3P0DN86 165 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 CGB7P0DN87 165 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 CCL4P13236 92 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 SELEP16581 610 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 CTRLP40313 264 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 CEBPGP53567 150 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 HOXA4Q00056 320 aaPredicted RBP3.21□□□□□ -1.9
CLTC-209ENST00000498711 DCAF12Q5T6F0 453 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 ZNF114Q8NC26 417 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 DTD1Q8TEA8 209 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 HSD17B10Q99714 261 aaKnown RBP3.21□□□□□ -1.9
CLTC-209ENST00000498711 MIEN1Q9BRT3 115 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 IL36BQ9NZH7 164 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 BOKQ9UMX3 212 aaPredicted RBP3.21□□□□□ -1.9
CLTC-209ENST00000498711 PPP1R3CQ9UQK1 317 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 POLDIP2Q9Y2S7 368 aa3.21□□□□□ -1.9
CLTC-209ENST00000498711 PRRC2CQ9Y520 2896 aaKnown RBP3.21□□□□□ -1.9
CLTC-209ENST00000498711 ARID1BQ8NFD5 2236 aaPredicted RBP3.2□□□□□ -1.9
CLTC-209ENST00000498711 SHANK1Q9Y566 2161 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 TMEM30CPA0ZSE6 113 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 C21orf140B9A014 251 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 C12orf77C9JDV5 145 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 C11orf94C9JXX5 98 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 ZG16O60844 167 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 RAMP3O60896 148 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 SMPD2O60906 423 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 LINC00614P0C842 121 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 VPREB1P12018 145 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 TIMP3P35625 211 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 CDC34P49427 236 aaPredicted RBP3.2□□□□□ -1.9
CLTC-209ENST00000498711 CYB561P49447 251 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 POU2AF1Q16633 256 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 COX19Q49B96 90 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 SLC25A24Q6NUK1 477 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 OR4F5Q8NH21 305 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 TMEM37Q8WXS4 190 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 DDB2Q92466 427 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 CORO2AQ92828 525 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 COQ2Q96H96 371 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 SFRP2Q96HF1 295 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 OR4F4Q96R69 305 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 SFXN3Q9BWM7 321 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 TMEM106BQ9NUM4 274 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 DCAF16Q9NXF7 216 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 TRAPPC1Q9Y5R8 145 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 MYO7BQ6PIF6 2116 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 UNC13CQ8NB66 2214 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 TRBV20OR9-2A0A075B6H5 130 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 PAX4O43316 350 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 S1PR2O95136 353 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 HAND1O96004 215 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 KRASP01116 189 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 KITLGP21583 273 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 BMP5P22003 454 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 CFHR2P36980 270 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 PPP1CBP62140 327 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 CATR1Q13166 79 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 OR1C1Q15619 314 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 LINC00696Q6ZRV3 163 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 TIPARPQ7Z3E1 657 aaKnown RBP3.2□□□□□ -1.9
CLTC-209ENST00000498711 TMEM256Q8N2U0 113 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 C17orf78Q8N4C9 275 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 MDS2Q8NDY4 140 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 CT55Q8WUE5 264 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 APH1AQ96BI3 265 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 RPUSD4Q96CM3 377 aaKnown RBP3.2□□□□□ -1.9
CLTC-209ENST00000498711 BBC3Q96PG8 261 aaPredicted RBP3.2□□□□□ -1.9
CLTC-209ENST00000498711 MGST2Q99735 147 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 GNB1LQ9BYB4 327 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 SLC25A22Q9H936 323 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 CLN8Q9UBY8 286 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 PI4KAP42356 2102 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 INS-IGF2F8WCM5 200 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 K7EN84 100 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 DLEU1O43261 78 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 CLDN1O95832 211 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 CXorf1O96002 111 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 HPRT1P00492 218 aa3.2□□□□□ -1.9
CLTC-209ENST00000498711 HBZP02008 142 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms