RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 MRPS7Q9Y2R9 242 aaKnown RBP11.9□□□□□ -0.5
MUC1-220ENST00000498431 PRELID3BQ9Y3B1 194 aa11.9□□□□□ -0.5
MUC1-220ENST00000498431 IGLV11-55A0A075B6I3 123 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 CTDSP2O14595 271 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 XRCC3O43542 346 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 HLA-DQB1P01920 261 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 EIF4EP06730 217 aaKnown RBP11.89□□□□□ -0.51
MUC1-220ENST00000498431 ELK1P19419 428 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 GPR183P32249 361 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 EIF4EBP1Q13541 118 aaPredicted RBP11.89□□□□□ -0.51
MUC1-220ENST00000498431 CDNFQ49AH0 187 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 SSX9Q7RTT3 188 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 OR2C3Q8N628 320 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 PHLDA1Q8WV24 401 aaPredicted RBP11.89□□□□□ -0.51
MUC1-220ENST00000498431 RNF183Q96D59 192 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 GPHA2Q96T91 129 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 OR2W1Q9Y3N9 320 aa11.89□□□□□ -0.51
MUC1-220ENST00000498431 TRAV18A0A075B6X5 111 aa11.88□□□□□ -0.51
MUC1-220ENST00000498431 ATF4P18848 351 aaPredicted RBP11.88□□□□□ -0.51
MUC1-220ENST00000498431 MAS1LP35410 378 aa11.88□□□□□ -0.51
MUC1-220ENST00000498431 TALDO1P37837 337 aa11.88□□□□□ -0.51
MUC1-220ENST00000498431 CNPY1Q3B7I2 92 aa11.88□□□□□ -0.51
MUC1-220ENST00000498431 ODF3L2Q3SX64 289 aa11.88□□□□□ -0.51
MUC1-220ENST00000498431 LGALS9CQ6DKI2 356 aa11.88□□□□□ -0.51
MUC1-220ENST00000498431 OR4S2Q8NH73 311 aa11.88□□□□□ -0.51
MUC1-220ENST00000498431 VSTM2AQ8TAG5 236 aa11.88□□□□□ -0.51
MUC1-220ENST00000498431 TCTEX1D2Q8WW35 142 aa11.88□□□□□ -0.51
MUC1-220ENST00000498431 MARC2Q969Z3 335 aa11.88□□□□□ -0.51
MUC1-220ENST00000498431 MIXL1Q9H2W2 232 aa11.88□□□□□ -0.51
MUC1-220ENST00000498431 MRPL27Q9P0M9 148 aaKnown RBP11.88□□□□□ -0.51
MUC1-220ENST00000498431 TRBV7-1A0A0A6YYK4 115 aa11.87□□□□□ -0.51
MUC1-220ENST00000498431 DHFRP00374 187 aa11.87□□□□□ -0.51
MUC1-220ENST00000498431 DEFA4P12838 97 aa11.87□□□□□ -0.51
MUC1-220ENST00000498431 HIST1H1BP16401 226 aaKnown RBP11.87□□□□□ -0.51
MUC1-220ENST00000498431 RPL35AP18077 110 aaKnown RBP11.87□□□□□ -0.51
MUC1-220ENST00000498431 TMEM69Q5SWH9 247 aa11.87□□□□□ -0.51
MUC1-220ENST00000498431 ZNF502Q8TBZ5 544 aa11.87□□□□□ -0.51
MUC1-220ENST00000498431 SPAG8Q99932 426 aaPredicted RBP11.87□□□□□ -0.51
MUC1-220ENST00000498431 UBE2CO00762 179 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 RPA2P15927 270 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 DTYMKP23919 212 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 FCGR2BP31994 310 aaPredicted RBP11.86□□□□□ -0.51
MUC1-220ENST00000498431 S100A5P33763 92 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 RPL8P62917 257 aaKnown RBP11.86□□□□□ -0.51
MUC1-220ENST00000498431 PRR20EP86478 221 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 PRR20CP86479 221 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 PRR20DP86480 221 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 PRR20BP86481 221 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 PRR20AP86496 221 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 HACD4Q5VWC8 232 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 SLC38A6Q8IZM9 456 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 MFSD4AQ8N468 514 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 STPG3Q8N7X2 389 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 CXorf58Q96LI9 332 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 C5orf66Q9H5L9 145 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 AUNIPQ9H7T9 357 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 TAS2R8Q9NYW2 309 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 EXTL2Q9UBQ6 330 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 UFC1Q9Y3C8 167 aa11.86□□□□□ -0.51
MUC1-220ENST00000498431 FAT2Q9NYQ8 4349 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 KIR2DL5BA0A0G2JN68 375 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 KIR2DL5BA0A0G2JPC4 375 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 TMEM235A6NFC5 223 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 TSPAN4O14817 238 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 HLA-GP17693 338 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 ELLP55199 621 aaPredicted RBP11.85□□□□□ -0.51
MUC1-220ENST00000498431 TAS2R20P59543 309 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 GNG2P59768 71 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 CNIH2Q6PI25 160 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 PLET1Q6UQ28 207 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 KIR2DL5AQ8N109 375 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 KIR2DL5BQ8NHK3 375 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 DIRAS2Q96HU8 199 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 HSD17B10Q99714 261 aaKnown RBP11.85□□□□□ -0.51
MUC1-220ENST00000498431 ZNF436Q9C0F3 470 aaPredicted RBP11.85□□□□□ -0.51
MUC1-220ENST00000498431 PKHD1P08F94 4074 aa11.85□□□□□ -0.51
MUC1-220ENST00000498431 TRAV3A0A0B4J244 114 aa11.84□□□□□ -0.51
MUC1-220ENST00000498431 IGLC7A0M8Q6 106 aa11.84□□□□□ -0.51
MUC1-220ENST00000498431 SLC22A5O76082 557 aa11.84□□□□□ -0.51
MUC1-220ENST00000498431 TNFSF8P32971 234 aa11.84□□□□□ -0.51
MUC1-220ENST00000498431 OR2B8PP59922 312 aa11.84□□□□□ -0.51
MUC1-220ENST00000498431 C15orf40Q8WUR7 153 aa11.84□□□□□ -0.51
MUC1-220ENST00000498431 NUDCD2Q8WVJ2 157 aa11.84□□□□□ -0.51
MUC1-220ENST00000498431 TMEM190Q8WZ59 177 aa11.84□□□□□ -0.51
MUC1-220ENST00000498431 MAP6D1Q9H9H5 199 aa11.84□□□□□ -0.51
MUC1-220ENST00000498431 RABL2AQ9UBK7 228 aaPredicted RBP11.84□□□□□ -0.51
MUC1-220ENST00000498431 RABL2BQ9UNT1 228 aa11.84□□□□□ -0.51
MUC1-220ENST00000498431 DNAH2Q9P225 4427 aa11.84□□□□□ -0.51
MUC1-220ENST00000498431 IGHV3OR16-8A0A075B7F1 116 aa11.83□□□□□ -0.52
MUC1-220ENST00000498431 TGOLN2O43493 480 aa11.83□□□□□ -0.52
MUC1-220ENST00000498431 TNFSF12O43508 249 aa11.83□□□□□ -0.52
MUC1-220ENST00000498431 HRASP01112 189 aa11.83□□□□□ -0.52
MUC1-220ENST00000498431 CTXN2P0C2S0 81 aa11.83□□□□□ -0.52
MUC1-220ENST00000498431 NANOS2P60321 138 aaKnown RBP11.83□□□□□ -0.52
MUC1-220ENST00000498431 ZNF124Q15973 351 aa11.83□□□□□ -0.52
MUC1-220ENST00000498431 TMEM217Q8N7C4 229 aa11.83□□□□□ -0.52
MUC1-220ENST00000498431 OR5B3Q8NH48 314 aa11.83□□□□□ -0.52
MUC1-220ENST00000498431 BET1LQ9NYM9 111 aa11.83□□□□□ -0.52
MUC1-220ENST00000498431 PTTG2Q9NZH5 202 aa11.83□□□□□ -0.52
MUC1-220ENST00000498431 OR2T8A6NH00 312 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms