RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 NOTCH3Q9UM47 2321 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 A0A0B4J2A0 478 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 HMX3A6NHT5 357 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 DHFRP00374 187 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 TRGV3P03979 118 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 H2AFB2P0C5Z0 115 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 OR4E1P0C645 316 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 TRAPPC2P0DI81 140 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 TRAPPC2BP0DI82 140 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 MYOD1P15172 320 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 TPPP2P59282 170 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 CD83Q01151 205 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 IZUMO4Q1ZYL8 232 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 C19orf54Q5BKX5 351 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 HIST2H2BDQ6DRA6 164 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 LCNL1Q6ZST4 164 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 LYG2Q86SG7 212 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 SLC35G3Q8N808 338 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 OR5T1Q8NG75 326 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 OR5B3Q8NH48 314 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 LHFPL5Q8TAF8 219 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 FAM110DQ8TAY7 271 aaPredicted RBP7.57□□□□□ -1.2
PRPF3-207ENST00000496202 TMEM56Q96MV1 263 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 SRSF8Q9BRL6 282 aaKnown RBP7.57□□□□□ -1.2
PRPF3-207ENST00000496202 ZFP57Q9NU63 452 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 TMEM14BQ9NUH8 114 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 SHPKQ9UHJ6 478 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 TMEM56-RWDD3S4R434 201 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 ANK2Q01484 3957 aa7.57□□□□□ -1.2
PRPF3-207ENST00000496202 TEX50A0A1B0GTY4 177 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 DUXBA0A1W2PPF3 345 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 C9orf170A2RU37 121 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 H3BUA1 57 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 CYB5BO43169 146 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 IFNA17P01571 189 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 IGLV1-40P01703 118 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 IL6RP08887 468 aaPredicted RBP7.56□□□□□ -1.2
PRPF3-207ENST00000496202 SULT1A3P0DMM9 295 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 SULT1A4P0DMN0 295 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 DEFA4P12838 97 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 PSMB8P28062 276 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 PPIFP30405 207 aaKnown RBP7.56□□□□□ -1.2
PRPF3-207ENST00000496202 RPL23AP62750 156 aaKnown RBP7.56□□□□□ -1.2
PRPF3-207ENST00000496202 IFITM3Q01628 133 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 DHRS2Q13268 280 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 TCTEX1D4Q5JR98 221 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 HSD17B13Q7Z5P4 300 aaPredicted RBP7.56□□□□□ -1.2
PRPF3-207ENST00000496202 KLHL30-AS1Q8NEE0 82 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 COQ8AQ8NI60 647 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 LSM10Q969L4 123 aaKnown RBP7.56□□□□□ -1.2
PRPF3-207ENST00000496202 MS4A10Q96PG2 267 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 SLA2Q9H6Q3 261 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 ENY2Q9NPA8 101 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 CACNG5Q9UF02 275 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 ZNF257Q9Y2Q1 563 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 MGAM2Q2M2H8 2515 aa7.56□□□□□ -1.2
PRPF3-207ENST00000496202 A0A0G2JRQ6 117 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 C13orf42A0A1B0GVH6 325 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 IGLC7A0M8Q6 106 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 NPIPB5A8MRT5 1133 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 TEX22C9J3V5 150 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 SOX15O60248 233 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 DUS4LO95620 317 aaKnown RBP7.55□□□□□ -1.2
PRPF3-207ENST00000496202 IFNA21P01568 189 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 P0C879 139 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 OR13C7P0DN81 318 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 AREGP15514 252 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 PSMB6P28072 239 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 HOXA1P49639 335 aaPredicted RBP7.55□□□□□ -1.2
PRPF3-207ENST00000496202 RAB9AP51151 201 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 HSPE1P61604 102 aaKnown RBP7.55□□□□□ -1.2
PRPF3-207ENST00000496202 TNP2Q05952 138 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 ANKRD55Q3KP44 614 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 ASPHD1Q5U4P2 390 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 PLET1Q6UQ28 207 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 LYZL2Q7Z4W2 148 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 RNF152Q8N8N0 203 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 OR4F17Q8NGA8 305 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 GPR146Q96CH1 333 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 OR4F4Q96R69 305 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 KLK15Q9H2R5 256 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 PLEKHA3Q9HB20 300 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 PALMDQ9NP74 551 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.55□□□□□ -1.2
PRPF3-207ENST00000496202 CACFD1Q9UGQ2 172 aa7.55□□□□□ -1.2
PRPF3-207ENST00000496202 A0A0B4J293 547 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 A0A0G2JLM5 398 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 A0A1B0GW64 132 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 DBX1A6NMT0 343 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 E7EUB6 86 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 ST8SIA3O43173 380 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 REG1AP05451 166 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 HOXB5P09067 269 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
PRPF3-207ENST00000496202 PRCDQ00LT1 54 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 SMCO1Q147U7 214 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 SPINK9Q5DT21 86 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 NMSQ5H8A3 153 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 NRARPQ7Z6K4 114 aa7.54□□□□□ -1.2
PRPF3-207ENST00000496202 ZNF429Q86V71 674 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms