RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 GPX1P07203 203 aa2.14□□□□□ -2.07
SSR3-208ENST00000496050 SNRPD2P62316 118 aaKnown RBP2.14□□□□□ -2.07
SSR3-208ENST00000496050 LRRC25Q8N386 305 aaPredicted RBP2.14□□□□□ -2.07
SSR3-208ENST00000496050 SPACA4Q8TDM5 124 aa2.14□□□□□ -2.07
SSR3-208ENST00000496050 OR8D2Q9GZM6 311 aa2.14□□□□□ -2.07
SSR3-208ENST00000496050 COMMD5Q9GZQ3 224 aa2.14□□□□□ -2.07
SSR3-208ENST00000496050 CMTM6Q9NX76 183 aa2.14□□□□□ -2.07
SSR3-208ENST00000496050 SLC22A1O15245 554 aa2.13□□□□□ -2.07
SSR3-208ENST00000496050 HLA-DRB1P01911 266 aa2.13□□□□□ -2.07
SSR3-208ENST00000496050 DEFA4P12838 97 aa2.13□□□□□ -2.07
SSR3-208ENST00000496050 HIST1H1TP22492 207 aaPredicted RBP2.13□□□□□ -2.07
SSR3-208ENST00000496050 NFYAP23511 347 aaPredicted RBP2.13□□□□□ -2.07
SSR3-208ENST00000496050 CCL20P78556 96 aa2.13□□□□□ -2.07
SSR3-208ENST00000496050 RPL18Q07020 188 aaKnown RBP2.13□□□□□ -2.07
SSR3-208ENST00000496050 ACOT6Q3I5F7 207 aaPredicted RBP2.13□□□□□ -2.07
SSR3-208ENST00000496050 ZNF565Q8N9K5 539 aa2.13□□□□□ -2.07
SSR3-208ENST00000496050 MCFD2Q8NI22 146 aa2.13□□□□□ -2.07
SSR3-208ENST00000496050 KLK6Q92876 244 aa2.13□□□□□ -2.07
SSR3-208ENST00000496050 ERMAPQ96PL5 475 aaPredicted RBP2.13□□□□□ -2.07
SSR3-208ENST00000496050 SCAF11Q99590 1463 aaKnown RBP2.13□□□□□ -2.07
SSR3-208ENST00000496050 ITGB4P16144 1822 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 GBF1Q92538 1859 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 A0A0D9SEW6 157 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 KPNA3O00505 521 aaPredicted RBP2.12□□□□□ -2.07
SSR3-208ENST00000496050 PRM2P04554 102 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 AESQ08117 197 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 NDUFA5Q16718 116 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 FAM27BQ5VT28 67 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 LPCAT3Q6P1A2 487 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 OR51V1Q9H2C8 321 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 CST9LQ9H4G1 147 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 CISHQ9NSE2 258 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 DOK5Q9P104 306 aa2.12□□□□□ -2.07
SSR3-208ENST00000496050 WRNQ14191 1432 aaPredicted RBP eCLIP2.11□□□□□ -2.07
SSR3-208ENST00000496050 NCOA1Q15788 1441 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 FABP5P3A8MUU1 101 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 TMEM114B3SHH9 223 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 C1QCP02747 245 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 HIST1H2BOP23527 126 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 HIST1H2BBP33778 126 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 RPL5P46777 297 aaKnown RBP2.11□□□□□ -2.07
SSR3-208ENST00000496050 EVX1P49640 407 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 HIST1H2BDP58876 126 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 HIST1H2BCP62807 126 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 HIST2H2BEQ16778 126 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 TMEM155Q4W5P6 130 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.11□□□□□ -2.07
SSR3-208ENST00000496050 IBA57Q5T440 356 aaKnown RBP2.11□□□□□ -2.07
SSR3-208ENST00000496050 OR5B17Q8NGF7 314 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 HIST1H2BHQ93079 126 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 C8orf76Q96K31 380 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 HIST1H2BNQ99877 126 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 HIST1H2BMQ99879 126 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.11□□□□□ -2.07
SSR3-208ENST00000496050 PTPRSQ13332 1948 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 CUL9Q8IWT3 2517 aa2.11□□□□□ -2.07
SSR3-208ENST00000496050 NUP155O75694 1391 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 MDC1Q14676 2089 aaKnown RBP2.1□□□□□ -2.07
SSR3-208ENST00000496050 TRBV10-2A0A0K0K1G8 114 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 MEIS3P1A6NDR6 274 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 OR51F1A6NGY5 319 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 TCRBP04435 133 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 TRGC1P0CF51 173 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 LSM6P62312 80 aaKnown RBP2.1□□□□□ -2.07
SSR3-208ENST00000496050 AADACL3Q5VUY0 350 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 RPL22L1Q6P5R6 122 aaKnown RBP2.1□□□□□ -2.07
SSR3-208ENST00000496050 SLC36A1Q7Z2H8 476 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 COA5Q86WW8 74 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 ANKRD29Q8N6D5 301 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 PPP1R2P1Q96PQ5 205 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 CMSS1Q9BQ75 279 aaKnown RBP2.1□□□□□ -2.07
SSR3-208ENST00000496050 ULBP3Q9BZM4 244 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 SLC22A13Q9Y226 551 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 PKIGQ9Y2B9 76 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 COL11A1P12107 1806 aaPredicted RBP2.1□□□□□ -2.07
SSR3-208ENST00000496050 MTUS2Q5JR59 1369 aa2.1□□□□□ -2.07
SSR3-208ENST00000496050 ZFHX2Q9C0A1 2572 aaPredicted RBP2.09□□□□□ -2.07
SSR3-208ENST00000496050 DOCK10Q96BY6 2186 aa2.09□□□□□ -2.07
SSR3-208ENST00000496050 AQP4P55087 323 aa2.09□□□□□ -2.07
SSR3-208ENST00000496050 RANP62826 216 aaKnown RBP2.09□□□□□ -2.07
SSR3-208ENST00000496050 HBA1P69905 142 aa2.09□□□□□ -2.07
SSR3-208ENST00000496050 ZNF625Q96I27 306 aaPredicted RBP2.09□□□□□ -2.07
SSR3-208ENST00000496050 HSPB9Q9BQS6 159 aa2.09□□□□□ -2.07
SSR3-208ENST00000496050 DERL1Q9BUN8 251 aa2.09□□□□□ -2.07
SSR3-208ENST00000496050 FBXL12Q9NXK8 326 aa2.09□□□□□ -2.07
SSR3-208ENST00000496050 RGS12O14924 1447 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 RALGAPA2Q2PPJ7 1873 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 TRGV2A0A075B6R0 118 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 DPRXA6NFQ7 191 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 F8W036 122 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 TRAPPC2LH3BP13 241 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 ORC5O43913 435 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 CRYZL1O95825 349 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 EIF2B2P49770 351 aaKnown RBP2.08□□□□□ -2.08
SSR3-208ENST00000496050 SRSF6Q13247 344 aaKnown RBP2.08□□□□□ -2.08
SSR3-208ENST00000496050 KCNJ8Q15842 424 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 SPANXN3Q5MJ09 141 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 OR13C4Q8NGS5 318 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 TSPAN32Q96QS1 320 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 MRPL27Q9P0M9 148 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms